RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 COASYQ13057 564 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 GPS2Q13227 327 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 PDCLQ13371 301 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 UBAP2Q5T6F2 1119 aaKnown RBP7.95□□□□□ -1.14
COL28A1-202ENST00000430711 DPY19L2P1Q6NXN4 242 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 PDXDC1Q6P996 788 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 GJB7Q6PEY0 223 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 POTEBQ6S5H4 581 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 DPP8Q6V1X1 898 aaPredicted RBP7.95□□□□□ -1.14
COL28A1-202ENST00000430711 DDX42Q86XP3 938 aaKnown RBP eCLIP7.95□□□□□ -1.14
COL28A1-202ENST00000430711 CERS5Q8N5B7 392 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 RAD54LQ92698 747 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 POLLQ9UGP5 575 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 NFU1Q9UMS0 254 aa7.95□□□□□ -1.14
COL28A1-202ENST00000430711 TAF1LQ8IZX4 1826 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 USP17L10C9JJH3 530 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 MEIS1O00470 390 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 BACH1O14867 736 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 AKR1B10O60218 316 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 PALMO75781 387 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 EIF3JO75822 258 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 UFL1O94874 794 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 HNRNPH3P31942 346 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 CCT5P48643 541 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 POLR2FP61218 127 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 KRT83P78385 493 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 LEKR1Q6ZMV7 388 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 MAMSTRQ6ZN01 415 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 OR2W6PQ8NHA6 318 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 NEDD1Q8NHV4 660 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 FAM212AQ96EL1 285 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 ZIM3Q96PE6 472 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 TANGO6Q9C0B7 1094 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 NEUROG2Q9H2A3 272 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 JMJD4Q9H9V9 463 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 CD209Q9NNX6 404 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 KCNQ5Q9NR82 932 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 PCDHA2Q9Y5H9 948 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 FOCADQ5VW36 1801 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 A0A1W2PQJ5 194 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 POTEFA5A3E0 1075 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 ZNF233A6NK53 670 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 RPS6KA5O75582 802 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 LCA5LO95447 670 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 FLT3P36888 993 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 MAGEA1P43355 309 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 IRAK1P51617 712 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 TDRD12Q587J7 1177 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 HSP90B2PQ58FF3 399 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 ARSHQ5FYA8 562 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 POTEEQ6S8J3 1075 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 ZNF662Q6ZS27 426 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 UNC13DQ70J99 1090 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 KRT25Q7Z3Z0 450 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 MSL3Q8N5Y2 521 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 FAM133AQ8N9E0 248 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 CASKIN2Q8WXE0 1202 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 LSM14BQ9BX40 385 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 RTCBQ9Y3I0 505 aaKnown RBP7.94□□□□□ -1.14
COL28A1-202ENST00000430711 HYOU1Q9Y4L1 999 aa7.94□□□□□ -1.14
COL28A1-202ENST00000430711 CEP350Q5VT06 3117 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 CNTNAP4Q9C0A0 1308 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 TARSL2A2RTX5 802 aaKnown RBP7.93□□□□□ -1.14
COL28A1-202ENST00000430711 GOLGA6BA6NDN3 693 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 RSPH10B2B2RC85 870 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 RIMBP2O15034 1052 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 MED24O75448 989 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 RSPH10BP0C881 870 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 SLC9A1P19634 815 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 NOP2P46087 812 aaKnown RBP7.93□□□□□ -1.14
COL28A1-202ENST00000430711 SCNN1DP51172 638 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 PPP4CP60510 307 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 NFIAQ12857 509 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 TUBB2AQ13885 445 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 GPR162Q16538 588 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 MAN2A1Q16706 1144 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 TMEM119Q4V9L6 283 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 MFSD14BQ5SR56 506 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 FAM83BQ5T0W9 1011 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 PRR5LQ6MZQ0 368 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 SV2BQ7L1I2 683 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 CCDC170Q8IYT3 715 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 ADGRF4Q8IZF3 695 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 MMGT1Q8N4V1 131 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 OLIG1Q8TAK6 271 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
COL28A1-202ENST00000430711 SCFD1Q8WVM8 642 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 TBC1D5Q92609 795 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 TUBB2BQ9BVA1 445 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 ANKRD2Q9GZV1 360 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 RIOX1Q9H6W3 641 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 MED4Q9NPJ6 270 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 JRKLQ9Y4A0 524 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 DAGLAQ9Y4D2 1042 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 SIPA1L1O43166 1804 aa7.93□□□□□ -1.14
COL28A1-202ENST00000430711 GPR75-ASB3A0A0A6YYF3 556 aa7.92□□□□□ -1.14
COL28A1-202ENST00000430711 ANO9A1A5B4 782 aa7.92□□□□□ -1.14
COL28A1-202ENST00000430711 GRID2IPA4D2P6 1211 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms