RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
CPNE4-201ENST00000429747 MAGOHBQ96A72 148 aaKnown RBP13.8□□□□□ -0.2
CPNE4-201ENST00000429747 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
CPNE4-201ENST00000429747 SFI1A8K8P3 1242 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 CLNS1AP54105 237 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PMS1P54277 932 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 MESDQ14696 234 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 TBC1D9BQ66K14 1250 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 USP17L6PQ6QN14 398 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 TAOK1Q7L7X3 1001 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 KIAA0825Q8IV33 1275 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 FAM186BQ8IYM0 893 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PLCB1Q9NQ66 1216 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PPP1R1BQ9UD71 204 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 POTECB2RU33 542 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 GCFC2P16383 781 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 SLCO1A2P46721 670 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 FBF1Q8TES7 1133 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PTPN22Q9Y2R2 807 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 MYMKA6NI61 221 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 CLTAP09496 248 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 IRAK1P51617 712 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 UBXN2AP68543 259 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 LRP10Q7Z4F1 713 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 RNF10Q8N5U6 811 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PBKQ96KB5 322 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 FERP16591 822 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 HERVK_113P62684 666 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 SF3B2Q13435 895 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 E2F5Q15329 346 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 ODR4Q5SWX8 454 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 WDR93Q6P2C0 686 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 SPICE1Q8N0Z3 855 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
CPNE4-201ENST00000429747 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
CPNE4-201ENST00000429747 HMGB1P1B2RPK0 211 aaPredicted RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 FOXP2O15409 715 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 SNAP25P60880 206 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 BIRC3Q13489 604 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 CCDC6Q16204 474 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 INTS8Q75QN2 995 aaKnown RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 RIOK1Q9BRS2 568 aaKnown RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 CAPN6Q9Y6Q1 641 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 KCNQ2O43526 872 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 ABL1P00519 1130 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 KLRK1P26718 216 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 LACTBP83111 547 aaPredicted RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 ICA1Q05084 483 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 ZBTB16Q05516 673 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 SETDB1Q15047 1291 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 LRRC31Q6UY01 552 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 TMEM139Q8IV31 216 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 RAB21Q9UL25 225 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 FGGP02679 453 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 DNAJC7Q99615 494 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 FAM114A2Q9NRY5 505 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 INTS9Q9NV88 658 aaKnown RBP13.78□□□□□ -0.2
CPNE4-201ENST00000429747 STK38LQ9Y2H1 464 aa13.78□□□□□ -0.2
CPNE4-201ENST00000429747 PNMA6FA0A0J9YX94 578 aa13.77□□□□□ -0.2
CPNE4-201ENST00000429747 A0A1B0GUA9 196 aa13.77□□□□□ -0.2
CPNE4-201ENST00000429747 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.2
CPNE4-201ENST00000429747 TTI2Q6NXR4 508 aa13.77□□□□□ -0.2
CPNE4-201ENST00000429747 CPXCR1Q8N123 301 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms