RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 A8MUI8 341 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 WNT7AO00755 349 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 TJP3O95049 919 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 CHGBP05060 677 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 FAM153BP0C7A2 387 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 CARSP49589 748 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 PLCD1P51178 756 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 CDK17Q00537 523 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 MDM2Q00987 491 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 BCL2A1Q16548 175 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 GSTA3Q16772 222 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 PARP6Q2NL67 630 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 FAM153CQ494X1 144 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 NEK1Q96PY6 1258 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 EIF2AQ9BY44 585 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 CCDC134Q9H6E4 229 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 CHPF2Q9P2E5 772 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 RNF14Q9UBS8 474 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 CNOT8Q9UFF9 292 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 FAM153AQ9UHL3 310 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 IQSEC3Q9UPP2 1182 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 MROH7-TTC4A0A0A0MT08 1334 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 LSM1O15116 133 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 HOXB7P09629 217 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 PORP16435 677 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 SARSP49591 514 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 RHBDL3P58872 404 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZC3H6P61129 1189 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 PDE1BQ01064 536 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 GUCY2DQ02846 1103 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 MORC3Q14149 939 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 SPATA1Q5VX52 437 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 C3orf62Q6ZUJ4 267 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 PEX5LQ8IYB4 626 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZNF333Q96JL9 665 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 SETDB2Q96T68 719 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 HINFPQ9BQA5 517 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 NSRP1Q9H0G5 558 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 HESX1Q9UBX0 185 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 NKX1-2Q9UD57 310 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 MAN1B1Q9UKM7 699 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 INTUQ9ULD6 942 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZMYND8Q9ULU4 1186 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 RPL26L1Q9UNX3 145 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 C1orf167Q5SNV9 1468 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 LMTK3Q96Q04 1460 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 KIF1AQ12756 1690 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 STRCP1A6NGW2 1772 aa9.67□□□□□ -0.86
CDC42BPA-206ENST00000429440 BACH1O14867 736 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 PEX11AO75192 247 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 LGR5O75473 907 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 PDGFRBP09619 1106 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 KCNA3P22001 575 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CA8P35219 290 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 PAFAH1B1P43034 410 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 MTTPP55157 894 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 GEMIN4P57678 1058 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 HERVK_113P62684 666 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 HPCAP84074 193 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 OCRLQ01968 901 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 INAQ16352 499 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 SMUG1Q53HV7 270 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 SOGA3Q5TF21 947 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CDKAL1Q5VV42 579 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 RESP18Q5W5W9 173 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 DUS1LQ6P1R4 473 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 RSPH3Q86UC2 560 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 LRRC45Q96CN5 670 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 TRIM11Q96F44 468 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 MED15Q96RN5 788 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 QPCTLQ9NXS2 382 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 SPO11Q9Y5K1 396 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 MYH13Q9UKX3 1938 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CTNND1O60716 968 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 TPPPO94811 219 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 LMNAP02545 664 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 ANXA1P04083 346 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CCNB1P14635 433 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 FLT3P36888 993 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 SERPINB8P50452 374 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 ARPC4P59998 168 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 MUM1Q2TAK8 710 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CCDC152Q4G0S7 254 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 BEND3Q5T5X7 828 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZNF530Q6P9A1 599 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CCNJLQ8IV13 435 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 SCUBE1Q8IWY4 988 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 PIGOQ8TEQ8 1089 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 UCMAQ8WVF2 138 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 HAUS1Q96CS2 278 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 OLFM3Q96PB7 478 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 TUBGCP5Q96RT8 1024 aa9.66□□□□□ -0.86
CDC42BPA-206ENST00000429440 CENPKQ9BS16 269 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms