RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 PHF24Q9UPV7 400 aa25.34■■□□□ 1.65
PTPN18-205ENST00000428843 MOXD2PA6NHM9 499 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 ZEB2O60315 1214 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 CCNT1O60563 726 aaKnown RBP25.33■■□□□ 1.65
PTPN18-205ENST00000428843 ASGR1P07306 291 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 MMP3P08254 477 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 COL6A1P12109 1028 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 ACLYP53396 1101 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 HSDL1Q3SXM5 330 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 BRDTQ58F21 947 aaPredicted RBP25.33■■□□□ 1.65
PTPN18-205ENST00000428843 NECAB2Q7Z6G3 386 aa25.33■■□□□ 1.65
PTPN18-205ENST00000428843 NAP1L4Q99733 375 aaKnown RBP25.33■■□□□ 1.65
PTPN18-205ENST00000428843 DDX25Q9UHL0 483 aaKnown RBP25.33■■□□□ 1.65
PTPN18-205ENST00000428843 NFASCO94856 1347 aa25.33■■□□□ 1.64
PTPN18-205ENST00000428843 SLC37A4O43826 429 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 GCFC2P16383 781 aaKnown RBP25.32■■□□□ 1.64
PTPN18-205ENST00000428843 SYT1P21579 422 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 ITGB3BPQ13352 177 aaPredicted RBP25.32■■□□□ 1.64
PTPN18-205ENST00000428843 BECN1Q14457 450 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 PPP4R3AQ6IN85 833 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 FERMT2Q96AC1 680 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 ZNF577Q9BSK1 485 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 SENP6Q9GZR1 1112 aaPredicted RBP25.32■■□□□ 1.64
PTPN18-205ENST00000428843 TELO2Q9Y4R8 837 aa25.32■■□□□ 1.64
PTPN18-205ENST00000428843 VPS37CA5D8V6 355 aaPredicted RBP25.31■■□□□ 1.64
PTPN18-205ENST00000428843 IPO5O00410 1097 aaKnown RBP25.31■■□□□ 1.64
PTPN18-205ENST00000428843 WNT7AO00755 349 aa25.31■■□□□ 1.64
PTPN18-205ENST00000428843 MSH4O15457 936 aa25.31■■□□□ 1.64
PTPN18-205ENST00000428843 MYL3P08590 195 aa25.31■■□□□ 1.64
PTPN18-205ENST00000428843 SP4Q02446 784 aa25.31■■□□□ 1.64
PTPN18-205ENST00000428843 SDF4Q9BRK5 362 aa25.31■■□□□ 1.64
PTPN18-205ENST00000428843 A0A1W2PQ45 241 aaPredicted RBP25.3■■□□□ 1.64
PTPN18-205ENST00000428843 A0A1W2PQY0 241 aa25.3■■□□□ 1.64
PTPN18-205ENST00000428843 CXCL17Q6UXB2 119 aa25.3■■□□□ 1.64
PTPN18-205ENST00000428843 JPH1Q9HDC5 661 aaPredicted RBP25.3■■□□□ 1.64
PTPN18-205ENST00000428843 POLR3EQ9NVU0 708 aa25.3■■□□□ 1.64
PTPN18-205ENST00000428843 NOP56O00567 594 aaKnown RBP25.29■■□□□ 1.64
PTPN18-205ENST00000428843 DHX15O43143 795 aaKnown RBP25.29■■□□□ 1.64
PTPN18-205ENST00000428843 ATP2B1P20020 1258 aa25.29■■□□□ 1.64
PTPN18-205ENST00000428843 PURAQ00577 322 aaKnown RBP25.29■■□□□ 1.64
PTPN18-205ENST00000428843 DGKDQ16760 1214 aa25.29■■□□□ 1.64
PTPN18-205ENST00000428843 GPR20Q99678 358 aa25.29■■□□□ 1.64
PTPN18-205ENST00000428843 SLC9A2Q9UBY0 812 aa25.29■■□□□ 1.64
PTPN18-205ENST00000428843 DDX39AO00148 427 aaKnown RBP25.28■■□□□ 1.64
PTPN18-205ENST00000428843 KPNA6O60684 536 aa25.28■■□□□ 1.64
PTPN18-205ENST00000428843 HOXD8P13378 290 aaPredicted RBP25.28■■□□□ 1.64
PTPN18-205ENST00000428843 RGS19P49795 217 aa25.28■■□□□ 1.64
PTPN18-205ENST00000428843 ETNPPLQ8TBG4 499 aa25.28■■□□□ 1.64
PTPN18-205ENST00000428843 GJA10Q969M2 543 aa25.28■■□□□ 1.64
PTPN18-205ENST00000428843 GLT1D1Q96MS3 346 aa25.28■■□□□ 1.64
PTPN18-205ENST00000428843 TBC1D22BQ9NU19 505 aa25.28■■□□□ 1.64
PTPN18-205ENST00000428843 NOL7Q9UMY1 257 aaKnown RBP25.28■■□□□ 1.64
PTPN18-205ENST00000428843 PPFIA4O75335 1185 aa25.27■■□□□ 1.64
PTPN18-205ENST00000428843 CABYRO75952 493 aa25.27■■□□□ 1.64
PTPN18-205ENST00000428843 POTEDQ86YR6 584 aa25.27■■□□□ 1.64
PTPN18-205ENST00000428843 SLC5A5Q92911 643 aa25.27■■□□□ 1.64
PTPN18-205ENST00000428843 MTG1Q9BT17 334 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-205ENST00000428843 STARD7Q9NQZ5 370 aa25.27■■□□□ 1.64
PTPN18-205ENST00000428843 STX6O43752 255 aa25.26■■□□□ 1.63
PTPN18-205ENST00000428843 TRAPPC10P48553 1259 aa25.26■■□□□ 1.63
PTPN18-205ENST00000428843 TTC38Q5R3I4 469 aa25.26■■□□□ 1.63
PTPN18-205ENST00000428843 VTI1AQ96AJ9 217 aa25.26■■□□□ 1.63
PTPN18-205ENST00000428843 KCNMB3Q9NPA1 279 aa25.26■■□□□ 1.63
PTPN18-205ENST00000428843 MTMR6Q9Y217 621 aa25.26■■□□□ 1.63
PTPN18-205ENST00000428843 GSTTP1A0A1W2PQM5 241 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 ZNF286BP0CG31 522 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 MCM7P33993 719 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 TOB1P50616 345 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-205ENST00000428843 ATN1P54259 1190 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-205ENST00000428843 ACTR2P61160 394 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 NBR1Q14596 966 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 ZNF174Q15697 407 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 LRCH2Q5VUJ6 765 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 SLC39A5Q6ZMH5 540 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 FERMT3Q86UX7 667 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 SEPT1Q8WYJ6 367 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 RIT2Q99578 217 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 ELP1O95163 1332 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 ALPK3Q96L96 1907 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 SCN10AQ9Y5Y9 1956 aa25.25■■□□□ 1.63
PTPN18-205ENST00000428843 TBX3O15119 743 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 NEMFO60524 1076 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 GAS7O60861 476 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 PSMD10O75832 226 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 CCNE2O96020 404 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 LGALS2P05162 132 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 TCF7P36402 384 aaPredicted RBP25.24■■□□□ 1.63
PTPN18-205ENST00000428843 PSMC6P62333 389 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 KAT2BQ92831 832 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 HAS1Q92839 578 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 FAM20AQ96MK3 541 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 TEKT3Q9BXF9 490 aa25.24■■□□□ 1.63
PTPN18-205ENST00000428843 KRT76Q01546 638 aa25.23■■□□□ 1.63
PTPN18-205ENST00000428843 RESTQ13127 1097 aa25.23■■□□□ 1.63
PTPN18-205ENST00000428843 LRRC26Q2I0M4 334 aa25.23■■□□□ 1.63
PTPN18-205ENST00000428843 UTP14CQ5TAP6 766 aaKnown RBP25.23■■□□□ 1.63
PTPN18-205ENST00000428843 ZNF746Q6NUN9 644 aaPredicted RBP25.23■■□□□ 1.63
PTPN18-205ENST00000428843 BRAPQ7Z569 592 aa25.23■■□□□ 1.63
PTPN18-205ENST00000428843 C16orf70Q9BSU1 422 aa25.23■■□□□ 1.63
PTPN18-205ENST00000428843 TCEAL9Q9UHQ7 104 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms