RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TATDN2Q93075 761 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 LMBRD1Q9NUN5 540 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 GRIN2DO15399 1336 aa10.03□□□□□ -0.8
HDAC1-202ENST00000428704 COL4A4P53420 1690 aaPredicted RBP10.02□□□□□ -0.8
HDAC1-202ENST00000428704 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.81
HDAC1-202ENST00000428704 BAIAP3O94812 1187 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 ERVK-21P61565 698 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 NKX3-2P78367 333 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 RRP12Q5JTH9 1297 aaKnown RBP10.02□□□□□ -0.81
HDAC1-202ENST00000428704 SLFN13Q68D06 897 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 RCSD1Q6JBY9 416 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 LAPTM4BQ86VI4 370 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 GMCL1Q96IK5 515 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 NEK1Q96PY6 1258 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 AP5M1Q9H0R1 490 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 TRMT13Q9NUP7 481 aaKnown RBP10.02□□□□□ -0.81
HDAC1-202ENST00000428704 STX8Q9UNK0 236 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 ADGRG1Q9Y653 693 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 MCM3APO60318 1980 aa10.02□□□□□ -0.81
HDAC1-202ENST00000428704 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 H0Y858 1186 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 CYP21A2P08686 494 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 BMP3P12645 472 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TNFAIP2Q03169 654 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 FSCN1Q16658 493 aaKnown RBP10.01□□□□□ -0.81
HDAC1-202ENST00000428704 ME3Q16798 604 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 PTPROQ16827 1216 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TMCO2Q7Z6W1 182 aaPredicted RBP10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TLK2Q86UE8 772 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 PRPF38AQ8NAV1 312 aaKnown RBP10.01□□□□□ -0.81
HDAC1-202ENST00000428704 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 CHMP4CQ96CF2 233 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 PABPC5Q96DU9 382 aaKnown RBP10.01□□□□□ -0.81
HDAC1-202ENST00000428704 AGXT2Q9BYV1 514 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 SLC38A10Q9HBR0 1119 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TLR9Q9NR96 1032 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TCP11L1Q9NUJ3 509 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 CTNNA3Q9UI47 895 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TNKSO95271 1327 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 TRIOO75962 3097 aa10.01□□□□□ -0.81
HDAC1-202ENST00000428704 MYO15AQ9UKN7 3530 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 CACNA1HO95180 2353 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 DNAJC25-GNG10A0A024R161 153 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 C11orf97A0A1B0GVM6 126 aaPredicted RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 LINC01553A4QN01 128 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 PRR23AA6NEV1 266 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 GOLGA6L3A6NEY3 463 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 PROB1E7EW31 1015 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 ATP2A1O14983 1001 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 PCP11498 1178 aaKnown RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 TOB2Q14106 344 aaPredicted RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 MCTP1Q6DN14 999 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 SNRNP48Q6IEG0 339 aaKnown RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 ARMCX2Q7L311 632 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 TMEM87AQ8NBN3 555 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 KIFC2Q96AC6 838 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 MRPL38Q96DV4 380 aaKnown RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 RAD9AQ99638 391 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 TMEM47Q9BQJ4 181 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 TEX13BQ9BXU2 312 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 TOMM22Q9NS69 142 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 CLDND1Q9NY35 253 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 SEPT9Q9UHD8 586 aaPredicted RBP10□□□□□ -0.81
HDAC1-202ENST00000428704 FEM1BQ9UK73 627 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 TPCN1Q9ULQ1 816 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 SMC3Q9UQE7 1217 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 ATP6V1DQ9Y5K8 247 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 ASTN1O14525 1302 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 EPG5Q9HCE0 2579 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
HDAC1-202ENST00000428704 MED19A0JLT2 244 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-202ENST00000428704 TMEM232C9JQI7 657 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 SMAPO00193 183 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 ZNF213O14771 459 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 STX6O43752 255 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 KDM4AO75164 1064 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 MBD3O95983 291 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 OATP04181 439 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 ZSCAN22P10073 491 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-202ENST00000428704 CPA1P15085 419 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 PDCP20941 246 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 SYT1P21579 422 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 SLC1A4P43007 532 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 STAT2P52630 851 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 VCPP55072 806 aaKnown RBP9.99□□□□□ -0.81
HDAC1-202ENST00000428704 EVCP57679 992 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 ZNF445P59923 1031 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 WDR5P61964 334 aaKnown RBP9.99□□□□□ -0.81
HDAC1-202ENST00000428704 EXOSC10Q01780 885 aaKnown RBP9.99□□□□□ -0.81
HDAC1-202ENST00000428704 ST3GAL1Q11201 340 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 TCEAL5Q5H9L2 206 aa9.99□□□□□ -0.81
HDAC1-202ENST00000428704 MFSD6Q6ZSS7 791 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms