RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 OSBP2Q969R2 916 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 C1orf74Q96LT6 269 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 SEC62Q99442 399 aaKnown RBP9.9□□□□□ -0.82
ABCA8-202ENST00000428549 PLCB1Q9NQ66 1216 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 ATP8A2Q9NTI2 1148 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 TMEM260Q9NX78 707 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 SNCAIPQ9Y6H5 919 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 FAM205AQ6ZU69 1335 aa9.9□□□□□ -0.82
ABCA8-202ENST00000428549 ESPNB1AK53 854 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 M0R2C6 588 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 COBLO75128 1261 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 BAG2O95816 211 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 CHGBP05060 677 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 PTH1RQ03431 593 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 FMR1Q06787 632 aaKnown RBP eCLIP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 TRAF1Q13077 416 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 PAK2Q13177 524 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 GRM1Q13255 1194 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 GFOD2Q3B7J2 385 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NXNQ6DKJ4 435 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 LLGL2Q6P1M3 1020 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 MAGEB6Q8N7X4 407 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 BICD2Q8TD16 824 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NUP133Q8WUM0 1156 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 EIF2AK1Q9BQI3 630 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 ZNF408Q9H9D4 720 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 SRA1Q9HD15 236 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 ZCCHC17Q9NP64 241 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RASSF1Q9NS23 344 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 ETAA1Q9NY74 926 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 TMX2Q9Y320 296 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 J3KRW8 73 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RTCAO00442 366 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 GPAA1O43292 621 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 PRPF3O43395 683 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NEMFO60524 1076 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 DESP17661 470 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 MRE11P49959 708 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 CLCN6P51797 869 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 TNIP1Q15025 636 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 ACAP1Q15027 740 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NECTIN1Q15223 517 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RABEP1Q15276 862 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 SHROOM1Q2M3G4 852 aaPredicted RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 MAP7D1Q3KQU3 841 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RRP12Q5JTH9 1297 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NEK10Q6ZWH5 1172 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 ZBTB9Q96C00 473 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 PUS7LQ9H0K6 701 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 CDH19Q9H159 772 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 KIAA1586Q9HCI6 787 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NEUROD4Q9HD90 331 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 DKK3Q9UBP4 350 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 NOSIPQ9Y314 301 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RBM8AQ9Y5S9 174 aaKnown RBP9.89□□□□□ -0.83
ABCA8-202ENST00000428549 RPAP1Q9BWH6 1393 aaPredicted RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 M0QX08 132 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 PLOD3O60568 738 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 CDKL5O76039 1030 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 DDNO94850 711 aaPredicted RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 KRT13P13646 458 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 NEK2P51955 445 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 PRKG2Q13237 762 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 DIXDC1Q155Q3 683 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 SPDYCQ5MJ68 293 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 NAA16Q6N069 864 aaPredicted RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 TMC7Q7Z402 723 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 RBM12BQ8IXT5 1001 aaKnown RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 GPC2Q8N158 579 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 SIX5Q8N196 739 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 DCLK2Q8N568 766 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 PJA1Q8NG27 643 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 NSUN4Q96CB9 384 aaKnown RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 ELAC2Q9BQ52 826 aaKnown RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 TRIM55Q9BYV6 548 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 TSPYL2Q9H2G4 693 aaPredicted RBP9.88□□□□□ -0.83
ABCA8-202ENST00000428549 ZMYM6O95789 1325 aa9.88□□□□□ -0.83
ABCA8-202ENST00000428549 ECE2O60344 883 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 POTEIP0CG38 1075 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 HSPD1P10809 573 aaKnown RBP9.87□□□□□ -0.83
ABCA8-202ENST00000428549 VEGFAP15692 232 aaPredicted RBP9.87□□□□□ -0.83
ABCA8-202ENST00000428549 ZKSCAN1P17029 563 aaPredicted RBP9.87□□□□□ -0.83
ABCA8-202ENST00000428549 GNAT2P19087 354 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 CYP7A1P22680 504 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 PRDX5P30044 214 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 INPP5BP32019 993 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 FKBP1AP62942 108 aaKnown RBP9.87□□□□□ -0.83
ABCA8-202ENST00000428549 GSTO1P78417 241 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 SKOR1P84550 965 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 CXCL9Q07325 125 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 LRRC74AQ0VAA2 488 aa9.87□□□□□ -0.83
ABCA8-202ENST00000428549 PLCB4Q15147 1175 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms