RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DHX37Q8IY37 1157 aaKnown RBP10.46□□□□□ -0.73
SMC1A-203ENST00000428014 CAGE1Q8TC20 777 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 FERMT2Q96AC1 680 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 JADE2Q9NQC1 790 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 TMEM39AQ9NV64 488 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 PCDHA6Q9UN73 950 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 PCDHA8Q9Y5H6 950 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 GRIN2DO15399 1336 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 SMCO2A6NFE2 343 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 MEIS1O00470 390 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 CPLX1O14810 134 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 PFKFB2O60825 505 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 RAG1P15918 1043 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 XBP1P17861 261 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 SLC26A2P50443 739 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 FXR1P51114 621 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 USP11P51784 963 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 BEX3Q00994 111 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 SETQ01105 290 aaPredicted RBP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 PPIGQ13427 754 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 CEP55Q53EZ4 464 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 TYW1BQ6NUM6 668 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 RPAINQ86UA6 219 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 REXO1Q8N1G1 1221 aaKnown RBP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 TMEM199Q8N511 208 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 CCDC155Q8N6L0 562 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 WASF1Q92558 559 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 TCEANC2Q96MN5 208 aa10.45□□□□□ -0.74
SMC1A-203ENST00000428014 UBE2OQ9C0C9 1292 aaKnown RBP10.45□□□□□ -0.74
SMC1A-203ENST00000428014 EMSYQ7Z589 1322 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 PQBP1O60828 265 aaKnown RBP10.44□□□□□ -0.74
SMC1A-203ENST00000428014 GGPS1O95749 300 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 MYCLP12524 364 aaPredicted RBP10.44□□□□□ -0.74
SMC1A-203ENST00000428014 KCNA2P16389 499 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 ITGB5P18084 799 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 FPGSQ05932 587 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 BFSP2Q13515 415 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 MTMR1Q13613 665 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 LY6KQ17RY6 165 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 RASIP1Q5U651 963 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
SMC1A-203ENST00000428014 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
SMC1A-203ENST00000428014 IL31RAQ8NI17 732 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 KAT2BQ92831 832 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 MXRA8Q9BRK3 442 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 C16orf70Q9BSU1 422 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 ANO3Q9BYT9 981 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 MLXIPQ9HAP2 919 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 GTF2IRD1Q9UHL9 959 aa10.44□□□□□ -0.74
SMC1A-203ENST00000428014 LAMA3Q16787 3333 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 B4GALT4O60513 344 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 GNAT1P11488 350 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 SMAD3P84022 425 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 SP2Q02086 613 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 SSRP1Q08945 709 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 HSDL1Q3SXM5 330 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 C8orf34Q49A92 452 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 RPUSD2Q8IZ73 545 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 CCDC82Q8N4S0 544 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 AFAP1L1Q8TED9 768 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 SEPT1Q8WYJ6 367 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 VTI1AQ96AJ9 217 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 SPATA33Q96N06 139 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 NAP1L4Q99733 375 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 NOC4LQ9BVI4 516 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 UPF3BQ9BZI7 483 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 SLKQ9H2G2 1235 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 MTIF3Q9H2K0 278 aaKnown RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 TBC1D22BQ9NU19 505 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
SMC1A-203ENST00000428014 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 ZMYND8Q9ULU4 1186 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-203ENST00000428014 NRCAMQ92823 1304 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 CYP3A7-CYP3A51PA0A087WV96 503 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 H3BRB1 525 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 M0R2N6 131 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 NOP56O00567 594 aaKnown RBP10.42□□□□□ -0.74
SMC1A-203ENST00000428014 EFCAB14O75071 495 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 LGR5O75473 907 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 ATG7O95352 703 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 C7P10643 843 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 CPA1P15085 419 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 CYP3A7P24462 503 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 ARHGAP4P98171 946 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 PTK7Q13308 1070 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 TMEM63BQ5T3F8 832 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 PLPPR4Q7Z2D5 763 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms