RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 KRT79Q5XKE5 535 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 SNRNP48Q6IEG0 339 aaKnown RBP20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 STAMQ92783 540 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 PNMA5Q96PV4 448 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 TEX13BQ9BXU2 312 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 MAF1Q9H063 256 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 AP5Z1O43299 807 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 EN2P19622 333 aaPredicted RBP20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 RPS6P62753 249 aaKnown RBP20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 TMEM119Q4V9L6 283 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 HYIQ5T013 277 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 MLKLQ8NB16 471 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 RAET1EQ8TD07 263 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 SNX29Q8TEQ0 813 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 PLIN2Q99541 437 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 NUDT12Q9BQG2 462 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 STK17AQ9UEE5 414 aa20.15■□□□□ 0.82
AC055811.2-201ENST00000427497 UBXN2AP68543 259 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 CUL4BQ13620 913 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 CEP55Q53EZ4 464 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 POTEEQ6S8J3 1075 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 AOPEPQ8N6M6 819 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 ANKRD13CQ8N6S4 541 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.81
AC055811.2-201ENST00000427497 MEIS1O00470 390 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 MYCP01106 439 aaPredicted RBP20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 PRKCZQ05513 592 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 SLC30A10Q6XR72 485 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 LBX2Q6XYB7 198 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 ASCC2Q9H1I8 757 aaPredicted RBP20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 BLZF1Q9H2G9 400 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 BLOC1S4Q9NUP1 217 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 VAV3Q9UKW4 847 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 BECN2A8MW95 431 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 GOLGA6L19H0YKK7 550 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 IKBKBO14920 756 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 STAT3P40763 770 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 FAM110CQ1W6H9 321 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 PCNX4Q63HM2 1172 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 NIPA1Q7RTP0 329 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 MB21D1Q8N884 522 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 SLC5A5Q92911 643 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 TAAR1Q96RJ0 339 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 MXRA8Q9BRK3 442 aa20.13■□□□□ 0.81
AC055811.2-201ENST00000427497 KDM3AQ9Y4C1 1321 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 ADCY5O95622 1261 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 GRK4P32298 578 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 GCLCP48506 637 aaPredicted RBP20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 NCAPHQ15003 741 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 IL31RAQ8NI17 732 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 CDK5RAP3Q96JB5 506 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 UIMC1Q96RL1 719 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 GABRQQ9UN88 632 aa20.12■□□□□ 0.81
AC055811.2-201ENST00000427497 SEMA3FQ13275 785 aa20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 ECM1Q16610 540 aa20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 CT47A1Q5JQC4 288 aaPredicted RBP20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 NSMFQ6X4W1 530 aa20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 C7orf25Q9BPX7 421 aa20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 DACH1Q9UI36 760 aa20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 STK24Q9Y6E0 443 aa20.11■□□□□ 0.81
AC055811.2-201ENST00000427497 SMTNL1A8MU46 457 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 TNPO2O14787 897 aaKnown RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 PSMD10O75832 226 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 RPN1P04843 607 aaKnown RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 CCT6AP40227 531 aaKnown RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 BAATQ14032 418 aaPredicted RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 SARM1Q6SZW1 724 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 RAD54LQ92698 747 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 NT5C3AQ9H0P0 336 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 ACAD9Q9H845 621 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 RMND1Q9NWS8 449 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 UBIAD1Q9Y5Z9 338 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 KLRC4O43908 158 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 ITGB5P18084 799 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 AMPD3Q01432 767 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 KCNB1Q14721 858 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 PGM5Q15124 567 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 MTFR1Q15390 333 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 PRPF38BQ5VTL8 546 aaKnown RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 KCNK18Q7Z418 384 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 LARP4BQ92615 738 aaKnown RBP20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 RMDN3Q96TC7 470 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 PDCD2LQ9BRP1 358 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 TRIM9Q9C026 710 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 BTBD7Q9P203 1132 aa20.1■□□□□ 0.81
AC055811.2-201ENST00000427497 ARP10275 920 aa20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 FLT3LGP49771 235 aa20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 MYL5Q02045 173 aa20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 PPP2R5CQ13362 524 aa20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 HAUS3Q68CZ6 603 aa20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 SV2BQ7L1I2 683 aa20.09■□□□□ 0.81
AC055811.2-201ENST00000427497 RIOX2Q8IUF8 465 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms