RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KRT14P02533 472 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 PLCG2P16885 1265 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 RASA1P20936 1047 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 KCNJ6P48051 423 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 SHROOM1Q2M3G4 852 aaPredicted RBP14.79□□□□□ -0.04
USP42-203ENST00000426246 NT5DC1Q5TFE4 455 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 SLF2Q8IX21 1173 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 DDX12PQ92771 950 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 TSG101Q99816 390 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 LIMA1Q9UHB6 759 aaKnown RBP14.79□□□□□ -0.04
USP42-203ENST00000426246 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
USP42-203ENST00000426246 NFU1Q9UMS0 254 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 TLDC2A0PJX2 215 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 MYMKA6NI61 221 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 DDX39AO00148 427 aaKnown RBP14.78□□□□□ -0.04
USP42-203ENST00000426246 ACTN1P12814 892 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 NT5C2P49902 561 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 PDCLQ13371 301 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 AOC3Q16853 763 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 KIAA0753Q2KHM9 967 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 STRIP1Q5VSL9 837 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 WDR59Q6PJI9 974 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 HHIPL2Q6UWX4 724 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 KIAA0825Q8IV33 1275 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 FAM76AQ8TAV0 307 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 BCAS4Q8TDM0 211 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 PCDHAC2Q9Y5I4 1007 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 GNAQP50148 359 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 GNGT1P63211 74 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 IPO4Q8TEX9 1081 aaKnown RBP14.78□□□□□ -0.04
USP42-203ENST00000426246 EPB41L5Q9HCM4 733 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 PCDHA13Q9Y5I0 950 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 FER1L6Q2WGJ9 1857 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 BICDL2A1A5D9 508 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 CEP104O60308 925 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 CCNE1P24864 410 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 NOVP48745 357 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 GABPAQ06546 454 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 LARP4BQ92615 738 aaKnown RBP14.78□□□□□ -0.04
USP42-203ENST00000426246 TAF4BQ92750 862 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 MAD2L2Q9UI95 211 aa14.78□□□□□ -0.04
USP42-203ENST00000426246 C21orf2O43822 256 aa14.77□□□□□ -0.04
USP42-203ENST00000426246 HOXA13P31271 388 aaPredicted RBP14.77□□□□□ -0.04
USP42-203ENST00000426246 PRR16Q569H4 304 aa14.77□□□□□ -0.04
USP42-203ENST00000426246 KCNK18Q7Z418 384 aa14.77□□□□□ -0.04
USP42-203ENST00000426246 GPATCH11Q8N954 259 aa14.77□□□□□ -0.04
USP42-203ENST00000426246 MRIQ9BWK5 157 aa14.77□□□□□ -0.04
USP42-203ENST00000426246 KCNK3O14649 394 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 TRADDQ15628 312 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 CNNM4Q6P4Q7 775 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 TAX1BP1Q86VP1 789 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 IKZF4Q9H2S9 585 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 POTEB3A0JP26 581 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 POTECB2RU33 542 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 DPEP1P16444 411 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 PPP2R5BQ15173 497 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 CDC42EP5Q6NZY7 148 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 POTEBQ6S5H4 581 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 SH3RF1Q7Z6J0 888 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 FAM114A1Q8IWE2 563 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 CCDC51Q96ER9 411 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 PPANQ9NQ55 473 aaKnown RBP14.77□□□□□ -0.05
USP42-203ENST00000426246 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.05
USP42-203ENST00000426246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.77□□□□□ -0.05
USP42-203ENST00000426246 FAM237AA0A1B0GTK4 181 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 GDF11O95390 407 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 ADCY7P51828 1080 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 CKAP4Q07065 602 aaKnown RBP14.76□□□□□ -0.05
USP42-203ENST00000426246 CC2D2BQ6DHV5 1058 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
USP42-203ENST00000426246 DPH5Q9H2P9 285 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 TMEM51Q9NW97 253 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 MYH10P35580 1976 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 STXBP3O00186 592 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 KLHL30Q0D2K2 578 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 SLC35G1Q2M3R5 365 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 GPBP1Q86WP2 473 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 DGKHQ86XP1 1220 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 DUSP9Q99956 384 aaKnown RBP14.76□□□□□ -0.05
USP42-203ENST00000426246 TMX4Q9H1E5 349 aaPredicted RBP14.76□□□□□ -0.05
USP42-203ENST00000426246 SEMA6BQ9H3T3 888 aa14.76□□□□□ -0.05
USP42-203ENST00000426246 USP17L10C9JJH3 530 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 AKR1B1P15121 316 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 OR2W6PQ8NHA6 318 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 CCDC43Q96MW1 224 aaKnown RBP14.75□□□□□ -0.05
USP42-203ENST00000426246 PACSIN1Q9BY11 444 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 BCAS3Q9H6U6 928 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 PLIN4Q96Q06 1357 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 SORBS3O60504 671 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 HSF2BPO75031 334 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 USP14P54578 494 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 CCDC125Q86Z20 511 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 TTLL6Q8N841 843 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 ELMO3Q96BJ8 720 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 BARHL2Q9NY43 387 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 NDUFAB1O14561 156 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 326.3 ms