RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 DDX25Q9UHL0 483 aaKnown RBP27.78■■■□□ 2.04
VEGFA-209ENST00000425836 WNT7AO00755 349 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 GCFC2P16383 781 aaKnown RBP27.77■■■□□ 2.04
VEGFA-209ENST00000425836 HSDL1Q3SXM5 330 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 PPTC7Q8NI37 304 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 NAP1L4Q99733 375 aaKnown RBP27.77■■■□□ 2.04
VEGFA-209ENST00000425836 ZNF577Q9BSK1 485 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 PHF24Q9UPV7 400 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 IPO5O00410 1097 aaKnown RBP27.77■■■□□ 2.04
VEGFA-209ENST00000425836 MSH4O15457 936 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 SLC37A4O43826 429 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 ZEB2O60315 1214 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 ASGR1P07306 291 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 COL6A1P12109 1028 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 ACLYP53396 1101 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 BRDTQ58F21 947 aaPredicted RBP27.77■■■□□ 2.04
VEGFA-209ENST00000425836 TELO2Q9Y4R8 837 aa27.77■■■□□ 2.04
VEGFA-209ENST00000425836 NFASCO94856 1347 aa27.76■■■□□ 2.03
VEGFA-209ENST00000425836 VPS37CA5D8V6 355 aaPredicted RBP27.76■■■□□ 2.03
VEGFA-209ENST00000425836 MOXD2PA6NHM9 499 aa27.76■■■□□ 2.03
VEGFA-209ENST00000425836 MMP3P08254 477 aa27.76■■■□□ 2.03
VEGFA-209ENST00000425836 NECAB2Q7Z6G3 386 aa27.76■■■□□ 2.03
VEGFA-209ENST00000425836 MYH7BA7E2Y1 1941 aa27.76■■■□□ 2.03
VEGFA-209ENST00000425836 FRMPD3Q5JV73 1810 aa27.75■■■□□ 2.03
VEGFA-209ENST00000425836 DHX15O43143 795 aaKnown RBP27.75■■■□□ 2.03
VEGFA-209ENST00000425836 ATP2B1P20020 1258 aa27.75■■■□□ 2.03
VEGFA-209ENST00000425836 SDF4Q9BRK5 362 aa27.75■■■□□ 2.03
VEGFA-209ENST00000425836 C11orf49Q9H6J7 331 aa27.75■■■□□ 2.03
VEGFA-209ENST00000425836 FERMT2Q96AC1 680 aa27.74■■■□□ 2.03
VEGFA-209ENST00000425836 SENP6Q9GZR1 1112 aaPredicted RBP27.74■■■□□ 2.03
VEGFA-209ENST00000425836 JPH1Q9HDC5 661 aaPredicted RBP27.74■■■□□ 2.03
VEGFA-209ENST00000425836 STX6O43752 255 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 HOXD8P13378 290 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-209ENST00000425836 SP4Q02446 784 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 CXCL17Q6UXB2 119 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 ETNPPLQ8TBG4 499 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 SLC5A5Q92911 643 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 GPR20Q99678 358 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 TBC1D22BQ9NU19 505 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 MTMR6Q9Y217 621 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 A0A1W2PQ45 241 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-209ENST00000425836 A0A1W2PQY0 241 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 NOP56O00567 594 aaKnown RBP27.73■■■□□ 2.03
VEGFA-209ENST00000425836 MYL3P08590 195 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 TRAPPC10P48553 1259 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 DGKDQ16760 1214 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 GJA10Q969M2 543 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 POLR3EQ9NVU0 708 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 SLC9A2Q9UBY0 812 aa27.73■■■□□ 2.03
VEGFA-209ENST00000425836 NOL7Q9UMY1 257 aaKnown RBP27.73■■■□□ 2.03
VEGFA-209ENST00000425836 DDX39AO00148 427 aaKnown RBP27.72■■■□□ 2.03
VEGFA-209ENST00000425836 KPNA6O60684 536 aa27.72■■■□□ 2.03
VEGFA-209ENST00000425836 PPFIA4O75335 1185 aa27.72■■■□□ 2.03
VEGFA-209ENST00000425836 TOB1P50616 345 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-209ENST00000425836 PURAQ00577 322 aaKnown RBP27.72■■■□□ 2.03
VEGFA-209ENST00000425836 POTEDQ86YR6 584 aa27.72■■■□□ 2.03
VEGFA-209ENST00000425836 KCNMB3Q9NPA1 279 aa27.72■■■□□ 2.03
VEGFA-209ENST00000425836 FERMT3Q86UX7 667 aa27.71■■■□□ 2.03
VEGFA-209ENST00000425836 RIT2Q99578 217 aa27.71■■■□□ 2.03
VEGFA-209ENST00000425836 GSTTP1A0A1W2PQM5 241 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 CABYRO75952 493 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 MCM7P33993 719 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 ZNF174Q15697 407 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 TTC38Q5R3I4 469 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 SEPT1Q8WYJ6 367 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 GLT1D1Q96MS3 346 aa27.7■■■□□ 2.03
VEGFA-209ENST00000425836 PSMD10O75832 226 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 CCNE2O96020 404 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 RGS19P49795 217 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 NBR1Q14596 966 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 HAS1Q92839 578 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 FAM20AQ96MK3 541 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 MTG1Q9BT17 334 aaPredicted RBP27.69■■■□□ 2.02
VEGFA-209ENST00000425836 STARD7Q9NQZ5 370 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 TBX3O15119 743 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 NEMFO60524 1076 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 GAS7O60861 476 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 ACTR2P61160 394 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 LRCH2Q5VUJ6 765 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 BRAPQ7Z569 592 aa27.69■■■□□ 2.02
VEGFA-209ENST00000425836 ELP1O95163 1332 aa27.68■■■□□ 2.02
VEGFA-209ENST00000425836 RESTQ13127 1097 aa27.68■■■□□ 2.02
VEGFA-209ENST00000425836 RILPL1Q5EBL4 403 aa27.68■■■□□ 2.02
VEGFA-209ENST00000425836 KAT2BQ92831 832 aa27.68■■■□□ 2.02
VEGFA-209ENST00000425836 VTI1AQ96AJ9 217 aa27.68■■■□□ 2.02
VEGFA-209ENST00000425836 TEKT3Q9BXF9 490 aa27.68■■■□□ 2.02
VEGFA-209ENST00000425836 ZNF286BP0CG31 522 aa27.67■■■□□ 2.02
VEGFA-209ENST00000425836 PDIA4P13667 645 aaKnown RBP27.67■■■□□ 2.02
VEGFA-209ENST00000425836 TCF7P36402 384 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-209ENST00000425836 ATN1P54259 1190 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-209ENST00000425836 ORC2Q13416 577 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-209ENST00000425836 CALCRLQ16602 461 aa27.67■■■□□ 2.02
VEGFA-209ENST00000425836 SLC39A5Q6ZMH5 540 aa27.67■■■□□ 2.02
VEGFA-209ENST00000425836 C16orf70Q9BSU1 422 aa27.67■■■□□ 2.02
VEGFA-209ENST00000425836 TMEM60Q9H2L4 133 aa27.67■■■□□ 2.02
VEGFA-209ENST00000425836 PCDHB6Q9Y5E3 794 aa27.67■■■□□ 2.02
VEGFA-209ENST00000425836 ATG7O95352 703 aa27.66■■■□□ 2.02
VEGFA-209ENST00000425836 LGALS2P05162 132 aa27.66■■■□□ 2.02
VEGFA-209ENST00000425836 PSMC6P62333 389 aa27.66■■■□□ 2.02
VEGFA-209ENST00000425836 KRT76Q01546 638 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms