RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 Q4G0T1 1027 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 PPP4R3AQ6IN85 833 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 AFG1LQ8WV93 481 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 LENG9Q96B70 501 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 SDF4Q9BRK5 362 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 C11orf49Q9H6J7 331 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 DDX25Q9UHL0 483 aaKnown RBP24.88■■□□□ 1.57
HMGA2-205ENST00000425208 PHF24Q9UPV7 400 aa24.88■■□□□ 1.57
HMGA2-205ENST00000425208 ASGR1P07306 291 aa24.87■■□□□ 1.57
HMGA2-205ENST00000425208 MMP3P08254 477 aa24.87■■□□□ 1.57
HMGA2-205ENST00000425208 ACLYP53396 1101 aa24.87■■□□□ 1.57
HMGA2-205ENST00000425208 UBE2Q1Q7Z7E8 422 aa24.87■■□□□ 1.57
HMGA2-205ENST00000425208 ZNF577Q9BSK1 485 aa24.87■■□□□ 1.57
HMGA2-205ENST00000425208 NFASCO94856 1347 aa24.87■■□□□ 1.57
HMGA2-205ENST00000425208 IPO5O00410 1097 aaKnown RBP24.86■■□□□ 1.57
HMGA2-205ENST00000425208 NOP56O00567 594 aaKnown RBP24.86■■□□□ 1.57
HMGA2-205ENST00000425208 HSDL1Q3SXM5 330 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 MBOAT7Q96N66 472 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 BCAS3Q9H6U6 928 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 JPH1Q9HDC5 661 aaPredicted RBP24.86■■□□□ 1.57
HMGA2-205ENST00000425208 POLR3EQ9NVU0 708 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 VPS37CA5D8V6 355 aaPredicted RBP24.86■■□□□ 1.57
HMGA2-205ENST00000425208 COL6A1P12109 1028 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 SYT1P21579 422 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 ITGB3BPQ13352 177 aaPredicted RBP24.86■■□□□ 1.57
HMGA2-205ENST00000425208 DGKDQ16760 1214 aa24.86■■□□□ 1.57
HMGA2-205ENST00000425208 SENP6Q9GZR1 1112 aaPredicted RBP24.86■■□□□ 1.57
HMGA2-205ENST00000425208 KPNA6O60684 536 aa24.85■■□□□ 1.57
HMGA2-205ENST00000425208 SP4Q02446 784 aa24.85■■□□□ 1.57
HMGA2-205ENST00000425208 SPRYD3Q8NCJ5 442 aa24.85■■□□□ 1.57
HMGA2-205ENST00000425208 GLT1D1Q96MS3 346 aa24.85■■□□□ 1.57
HMGA2-205ENST00000425208 TBC1D22BQ9NU19 505 aa24.85■■□□□ 1.57
HMGA2-205ENST00000425208 NOL7Q9UMY1 257 aaKnown RBP24.85■■□□□ 1.57
HMGA2-205ENST00000425208 A0A1W2PQ45 241 aaPredicted RBP24.84■■□□□ 1.57
HMGA2-205ENST00000425208 A0A1W2PQY0 241 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 MSH4O15457 936 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 SLC37A4O43826 429 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 CABYRO75952 493 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 MYL3P08590 195 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 CXCL17Q6UXB2 119 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 FERMT2Q96AC1 680 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 SLC9A2Q9UBY0 812 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 TCEAL9Q9UHQ7 104 aa24.84■■□□□ 1.57
HMGA2-205ENST00000425208 ATP2B1P20020 1258 aa24.83■■□□□ 1.57
HMGA2-205ENST00000425208 TRAPPC10P48553 1259 aa24.83■■□□□ 1.57
HMGA2-205ENST00000425208 PURAQ00577 322 aaKnown RBP24.83■■□□□ 1.57
HMGA2-205ENST00000425208 UIMC1Q96RL1 719 aa24.83■■□□□ 1.57
HMGA2-205ENST00000425208 GPR20Q99678 358 aa24.83■■□□□ 1.57
HMGA2-205ENST00000425208 STARD7Q9NQZ5 370 aa24.83■■□□□ 1.57
HMGA2-205ENST00000425208 DDX39AO00148 427 aaKnown RBP24.82■■□□□ 1.56
HMGA2-205ENST00000425208 STX6O43752 255 aa24.82■■□□□ 1.56
HMGA2-205ENST00000425208 PPFIA4O75335 1185 aa24.82■■□□□ 1.56
HMGA2-205ENST00000425208 HOXD8P13378 290 aaPredicted RBP24.82■■□□□ 1.56
HMGA2-205ENST00000425208 ELP1O95163 1332 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 DHX15O43143 795 aaKnown RBP24.81■■□□□ 1.56
HMGA2-205ENST00000425208 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 ETNPPLQ8TBG4 499 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 SLC5A5Q92911 643 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 VTI1AQ96AJ9 217 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 RIT2Q99578 217 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 MTG1Q9BT17 334 aaPredicted RBP24.81■■□□□ 1.56
HMGA2-205ENST00000425208 SCN10AQ9Y5Y9 1956 aa24.81■■□□□ 1.56
HMGA2-205ENST00000425208 WNT7AO00755 349 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 NEMFO60524 1076 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 GAS7O60861 476 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 PDIA4P13667 645 aaKnown RBP24.8■■□□□ 1.56
HMGA2-205ENST00000425208 RGS19P49795 217 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 ORC2Q13416 577 aaPredicted RBP24.8■■□□□ 1.56
HMGA2-205ENST00000425208 TTC38Q5R3I4 469 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 LRCH2Q5VUJ6 765 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 BRAPQ7Z569 592 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 SEPT1Q8WYJ6 367 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 KCNMB3Q9NPA1 279 aa24.8■■□□□ 1.56
HMGA2-205ENST00000425208 TBX3O15119 743 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 MARCH6O60337 910 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 ZNF286BP0CG31 522 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 MCM7P33993 719 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 KRT76Q01546 638 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 RILPL1Q5EBL4 403 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 FAM20AQ96MK3 541 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 HTATIP2Q9BUP3 242 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 TEKT3Q9BXF9 490 aa24.79■■□□□ 1.56
HMGA2-205ENST00000425208 TCF7P36402 384 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-205ENST00000425208 ATN1P54259 1190 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-205ENST00000425208 ACTR2P61160 394 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 CALCRLQ16602 461 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 ZNF746Q6NUN9 644 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-205ENST00000425208 FERMT3Q86UX7 667 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 SLFN12Q8IYM2 578 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 KATNAL1Q9BW62 490 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 MTMR6Q9Y217 621 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 TELO2Q9Y4R8 837 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 A0A0U1RQG5 324 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-205ENST00000425208 BAG4O95429 457 aaKnown RBP24.78■■□□□ 1.56
HMGA2-205ENST00000425208 LGALS2P05162 132 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 SLC39A5Q6ZMH5 540 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 SMAP1Q8IYB5 467 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-205ENST00000425208 GJA10Q969M2 543 aa24.78■■□□□ 1.56
HMGA2-205ENST00000425208 GSTTP1A0A1W2PQM5 241 aa24.77■■□□□ 1.56
HMGA2-205ENST00000425208 PSMD10O75832 226 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms