RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 TRIM39Q9HCM9 518 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 FANCLQ9NW38 375 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 PPARGC1AQ9UBK2 798 aaKnown RBP5.65□□□□□ -1.5
HDAC9-209ENST00000425071 ASH2LQ9UBL3 628 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 DSEQ9UL01 958 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 SIT1Q9Y3P8 196 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 TBX22Q9Y458 520 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 MRPL42Q9Y6G3 142 aaKnown RBP5.65□□□□□ -1.5
HDAC9-209ENST00000425071 HMGXB3Q12766 1538 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 TCRBV16S1A1N1A0A5B0 115 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 RAPGEF3O95398 923 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 ASLP04424 464 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 FLT3P36888 993 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 EPHB3P54753 998 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 EPHA5P54756 1037 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 LINC00310P59036 64 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 NKX3-2P78367 333 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-209ENST00000425071 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 JAZF1Q86VZ6 243 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 ZSCAN18Q8TBC5 510 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-209ENST00000425071 TOE1Q96GM8 510 aaKnown RBP5.64□□□□□ -1.51
HDAC9-209ENST00000425071 SCLYQ96I15 445 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 FEZ1Q99689 392 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 KANSL2Q9H9L4 492 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 CATSPERZQ9NTU4 200 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 DTLQ9NZJ0 730 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 MAGEC2Q9UBF1 373 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-209ENST00000425071 PLAAQ9Y263 795 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 KCTD3Q9Y597 815 aa5.64□□□□□ -1.51
HDAC9-209ENST00000425071 NPIPB6E9PJ23 425 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 CYP2C8P10632 490 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 ATF2P15336 505 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 GJA4P35212 333 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 IGFALSP35858 605 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 FOXO4P98177 505 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 ZNF124Q15973 351 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 PLEKHG4Q58EX7 1191 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 CIAPIN1Q6FI81 312 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 CNKSR3Q6P9H4 555 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 EP400NLQ6ZTU2 488 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 FAM129CQ86XR2 697 aa5.63□□□□□ -1.51
HDAC9-209ENST00000425071 CCDC66A2RUB6 948 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 PPP1R12AO14974 1030 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-209ENST00000425071 NKRFO15226 690 aaKnown RBP eCLIP5.62□□□□□ -1.51
HDAC9-209ENST00000425071 CLSTN1O94985 981 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 COL6A2P12110 1019 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 HSD3B2P26439 372 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 PABPC4Q13310 644 aaKnown RBP eCLIP5.62□□□□□ -1.51
HDAC9-209ENST00000425071 ARHGAP36Q6ZRI8 547 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 KCTD1Q719H9 257 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-209ENST00000425071 KIAA0907Q7Z7F0 614 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-209ENST00000425071 DDX53Q86TM3 631 aaKnown RBP5.62□□□□□ -1.51
HDAC9-209ENST00000425071 TMEFF1Q8IYR6 380 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 ARRDC4Q8NCT1 418 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 NINJ1Q92982 152 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 CLUHP3Q96NS8 147 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 TMX1Q9H3N1 280 aa5.62□□□□□ -1.51
HDAC9-209ENST00000425071 SLC27A2O14975 620 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 RASGRP1O95267 797 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 CKMP06732 381 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 SRGAP2CP0DJJ0 459 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 PYGMP11217 842 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 PDE6AP16499 860 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 NCKAP1LP55160 1127 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 TUSC3Q13454 348 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 ARHGAP44Q17R89 818 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 FIGNQ5HY92 759 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 GIMAP6Q6P9H5 292 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 CD300LDQ6UXZ3 194 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 UBE2R2Q712K3 238 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-209ENST00000425071 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 CILP2Q8IUL8 1156 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 SIAH1Q8IUQ4 282 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 LINC00482Q8N8I6 264 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 SMARCC2Q8TAQ2 1214 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 DACT3Q96B18 629 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-209ENST00000425071 SRPK3Q9UPE1 567 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 PMF1-BGLAPU3KQ54 211 aa5.61□□□□□ -1.51
HDAC9-209ENST00000425071 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 NUAK1O60285 661 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 OPA1O60313 960 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 IGSF3O75054 1194 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 CLASP2O75122 1294 aaKnown RBP5.6□□□□□ -1.51
HDAC9-209ENST00000425071 CYP7B1O75881 506 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 FAHP16930 419 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 KCNA6P17658 529 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 PI3P19957 117 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 DNM2P50570 870 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 HTRA3P83110 453 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 SSPNQ14714 243 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 CR1LQ2VPA4 569 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 ZCCHC8Q6NZY4 707 aaKnown RBP5.6□□□□□ -1.51
HDAC9-209ENST00000425071 TEPPQ6URK8 271 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 OSTM1Q86WC4 334 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 TTLL6Q8N841 843 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 CLEC4DQ8WXI8 215 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms