RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
CLCN3P1-201ENST00000423965 GPSM3Q9Y4H4 160 aa9.53□□□□□ -0.88
CLCN3P1-201ENST00000423965 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.88
CLCN3P1-201ENST00000423965 USP17L12C9JPN9 530 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 USP17L21D6R901 530 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 ATF7P17544 494 aaPredicted RBP9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 FSHRP23945 695 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 CPT1AP50416 773 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 RRP1P56182 461 aaKnown RBP9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 DYNLL1P63167 89 aaKnown RBP9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 TAPT1Q6NXT6 567 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 UBALD2Q8IYN6 164 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 ADAM32Q8TC27 787 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 PCDHGC5Q9Y5F6 944 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 MYH1P12882 1939 aa9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 TRIP12Q14669 1992 aaPredicted RBP9.52□□□□□ -0.89
CLCN3P1-201ENST00000423965 C5orf67F2Z3F1 127 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 NBNO60934 754 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 AMHP03971 560 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 POLR3DP05423 398 aaPredicted RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 GRM5P41594 1212 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 NDUFV1P49821 464 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 WDR4P57081 412 aaKnown RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 ICA1Q05084 483 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 RBL2Q08999 1139 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 DUSP28Q4G0W2 176 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 BRDTQ58F21 947 aaPredicted RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 LRRC8DQ7L1W4 858 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 PRPF38AQ8NAV1 312 aaKnown RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 RPGRIP1Q96KN7 1286 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 HAUS7Q99871 368 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 ATP13A2Q9NQ11 1180 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 GMPR2Q9P2T1 348 aaKnown RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 PA2G4Q9UQ80 394 aaKnown RBP9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 HDAC5Q9UQL6 1122 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 MAP4K5Q9Y4K4 846 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 PARP14Q460N5 1801 aa9.51□□□□□ -0.89
CLCN3P1-201ENST00000423965 ZBED4O75132 1171 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 MYL3P08590 195 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 CNTN2Q02246 1040 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 TFCP2Q12800 502 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 YME1L1Q96TA2 773 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 SLF1Q9BQI6 1058 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 OCSTAMPQ9BR26 566 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 C11orf84Q9BUA3 381 aaPredicted RBP9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 IGFLR1Q9H665 355 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 VTA1Q9NP79 307 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 PDGFCQ9NRA1 345 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 CLEC1BQ9P126 229 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 SWAP70Q9UH65 585 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 TANC1Q9C0D5 1861 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 SCN10AQ9Y5Y9 1956 aa9.5□□□□□ -0.89
CLCN3P1-201ENST00000423965 LINC01565O15544 149 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 NR3C2P08235 984 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 CYP7A1P22680 504 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 PTGS1P23219 599 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 OAZ1P54368 228 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 PTGISQ16647 500 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 TCTN1Q2MV58 587 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 KIAA1211Q6ZU35 1233 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 SESTD1Q86VW0 696 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 EFHBQ8N7U6 833 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 RUBCNQ92622 972 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 TOP1MTQ969P6 601 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 CCDC17Q96LX7 622 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 INCENPQ9NQS7 918 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 RALYQ9UKM9 306 aaKnown RBP9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 CDV3Q9UKY7 258 aaKnown RBP9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 RWDD3Q9Y3V2 267 aa9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
CLCN3P1-201ENST00000423965 LGR5O75473 907 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 CKBP12277 381 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 TIMP2P16035 220 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 GTF2F1P35269 517 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 BMPR1AP36894 532 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 FAM83BQ5T0W9 1011 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 WDR63Q8IWG1 891 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 MYOCDQ8IZQ8 938 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 CPXCR1Q8N123 301 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 KCTD15Q96SI1 283 aaPredicted RBP9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 CTDP1Q9Y5B0 961 aaPredicted RBP9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 PTPRCP08575 1304 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 ZFYVE26Q68DK2 2539 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 MICAL3Q7RTP6 2002 aa9.48□□□□□ -0.89
CLCN3P1-201ENST00000423965 A6NJR5 290 aa9.47□□□□□ -0.89
CLCN3P1-201ENST00000423965 GRM6O15303 877 aa9.47□□□□□ -0.89
CLCN3P1-201ENST00000423965 ADRB1P08588 477 aa9.47□□□□□ -0.89
CLCN3P1-201ENST00000423965 UBTFL1P0CB47 393 aaPredicted RBP9.47□□□□□ -0.89
CLCN3P1-201ENST00000423965 EEF2P13639 858 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms