RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 FANCCQ00597 558 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 RNASELQ05823 741 aaKnown RBP10.72□□□□□ -0.69
CMSS1-201ENST00000421999 BAATQ14032 418 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-201ENST00000421999 FKBP1CQ5VVH2 108 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 KMT5AQ9NQR1 393 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 GOLGA6L9A6NEM1 432 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 BMS1Q14692 1282 aaKnown RBP10.72□□□□□ -0.69
CMSS1-201ENST00000421999 FBXL16Q8N461 479 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-201ENST00000421999 EHBP1Q8NDI1 1231 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 GOLGA1Q92805 767 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 FAM207AQ9NSI2 230 aaPredicted RBP10.72□□□□□ -0.69
CMSS1-201ENST00000421999 RESP18Q5W5W9 173 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 TIGD1Q96MW7 591 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 C4BP0C0L5 1744 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 KRT86O43790 486 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 TACC1O75410 805 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 ABL1P00519 1130 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 BACE1P56817 501 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 OSTNP61366 133 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 KRT83P78385 493 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 KIAA0753Q2KHM9 967 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 SHC4Q6S5L8 630 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 CNGA4Q8IV77 575 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 PIGOQ8TEQ8 1089 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 CRACR2AQ9BSW2 395 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 GUCA1BQ9UMX6 200 aa10.72□□□□□ -0.69
CMSS1-201ENST00000421999 TNNC2P02585 160 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 CLEC17AQ6ZS10 378 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 FMNL3Q8IVF7 1028 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 POLD4Q9HCU8 107 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 DISC1Q9NRI5 854 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 ZNF541Q9H0D2 1346 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 SMARCA1P28370 1054 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 ADAM9Q13443 819 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 NEDD9Q14511 834 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 LRRC41Q15345 812 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 SHROOM1Q2M3G4 852 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-201ENST00000421999 CCDC97Q96F63 343 aaPredicted RBP10.71□□□□□ -0.69
CMSS1-201ENST00000421999 GSDMAQ96QA5 445 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
CMSS1-201ENST00000421999 FANCLQ9NW38 375 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 COMMD10Q9Y6G5 202 aa10.71□□□□□ -0.69
CMSS1-201ENST00000421999 CCDC175P0C221 793 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 P4HA1P13674 534 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 TAL1P17542 331 aaPredicted RBP10.71□□□□□ -0.7
CMSS1-201ENST00000421999 IFRD2Q12894 506 aaPredicted RBP10.71□□□□□ -0.7
CMSS1-201ENST00000421999 PKN1Q16512 942 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 USP49Q70CQ1 688 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 ERO1BQ86YB8 467 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.71□□□□□ -0.7
CMSS1-201ENST00000421999 PAGE5Q96GU1 130 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 LZTFL1Q9NQ48 299 aa10.71□□□□□ -0.7
CMSS1-201ENST00000421999 ATP2C1P98194 919 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 CATSPER4Q7RTX7 472 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 GOLGA5Q8TBA6 731 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 ZNF668Q96K58 619 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 NAA15Q9BXJ9 866 aaKnown RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 CCDC113Q9H0I3 377 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 BTAF1O14981 1849 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 WDR64B1ANS9 1081 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 C6orf222P0C671 652 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 BCRP11274 1271 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 COPB2P35606 906 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 KIAA1841Q6NSI8 718 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 C11orf57Q6ZUT1 292 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 EXOC8Q8IYI6 725 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 FMR1NBQ8N0W7 255 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 CUEDC2Q9H467 287 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 ASB14A6NK59 587 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 TXNP10599 105 aaKnown RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 VCAM1P19320 739 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 DDIT3P35638 169 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 USP11P51784 963 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 SREBF2Q12772 1141 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 ANKRD13CQ8N6S4 541 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 KCNH4Q9UQ05 1017 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 ASTN2O75129 1339 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 MYH14Q7Z406 1995 aaKnown RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 CICQ96RK0 1608 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 GOLGA6L10A0A0M3HER8 536 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 AKR1B15C9JRZ8 316 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 K7ERI5 159 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 IPO5O00410 1097 aaKnown RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 CYTH3O43739 400 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 PLA2G4BP0C869 781 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 PRPHP41219 470 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 CEP55Q53EZ4 464 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 DCUN1D2Q6PH85 259 aa10.7□□□□□ -0.7
CMSS1-201ENST00000421999 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
CMSS1-201ENST00000421999 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms