RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MCF2LO15068 1137 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 POLR2MP0CAP2 368 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 UBE3CQ15386 1083 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
CLCN4-203ENST00000421085 HESX1Q9UBX0 185 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ATP5HO75947 161 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 BIRC2Q13490 618 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 SPARCL1Q14515 664 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 METTL13Q8N6R0 699 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 GLG1Q92896 1179 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 UBE2TQ9NPD8 197 aaPredicted RBP13.34□□□□□ -0.27
CLCN4-203ENST00000421085 TMEM191BP0C7N4 346 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ATG16L1Q676U5 607 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 CAPRIN2Q6IMN6 1127 aaKnown RBP13.34□□□□□ -0.27
CLCN4-203ENST00000421085 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ARMC2Q8NEN0 867 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ATP10BO94823 1461 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ADORA1P30542 326 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 PRPSAP1Q14558 356 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 OSBPL1AQ9BXW6 950 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ECT2Q9H8V3 914 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 STOML1Q9UBI4 398 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLCN4-203ENST00000421085 ZFP69BQ9UJL9 534 aa13.34□□□□□ -0.27
CLCN4-203ENST00000421085 MAGED2Q9UNF1 606 aaPredicted RBP13.34□□□□□ -0.27
CLCN4-203ENST00000421085 PPP2R2AP63151 447 aa13.33□□□□□ -0.27
CLCN4-203ENST00000421085 HP1BP3Q5SSJ5 553 aaPredicted RBP13.33□□□□□ -0.27
CLCN4-203ENST00000421085 ARHGEF16Q5VV41 709 aa13.33□□□□□ -0.27
CLCN4-203ENST00000421085 C16orf87Q6PH81 154 aa13.33□□□□□ -0.27
CLCN4-203ENST00000421085 DARS2Q6PI48 645 aaKnown RBP13.33□□□□□ -0.27
CLCN4-203ENST00000421085 RAB44Q7Z6P3 723 aaPredicted RBP13.33□□□□□ -0.27
CLCN4-203ENST00000421085 FBXO11Q86XK2 927 aa13.33□□□□□ -0.27
CLCN4-203ENST00000421085 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.27
CLCN4-203ENST00000421085 SNX24Q9Y343 169 aa13.33□□□□□ -0.27
CLCN4-203ENST00000421085 CCDC188H7C350 402 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 TRIM55Q9BYV6 548 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
CLCN4-203ENST00000421085 GSTA4O15217 222 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 PLCB4Q15147 1175 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 SRLQ86TD4 932 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 AIFM3Q96NN9 605 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 PPARGC1AQ9UBK2 798 aaKnown RBP13.33□□□□□ -0.28
CLCN4-203ENST00000421085 IPO11Q9UI26 975 aaKnown RBP13.33□□□□□ -0.28
CLCN4-203ENST00000421085 IQANK1A0A1B0GTG1 560 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 H0YCG3 227 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 SLC12A1Q13621 1099 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
CLCN4-203ENST00000421085 GINM1Q9NU53 330 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 ATICP31939 592 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 TMTC4Q5T4D3 741 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 RESP18Q5W5W9 173 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 PGBD1Q96JS3 809 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 ANO3Q9BYT9 981 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 PCIF1Q9H4Z3 704 aa13.33□□□□□ -0.28
CLCN4-203ENST00000421085 NUP153P49790 1475 aaKnown RBP13.33□□□□□ -0.28
CLCN4-203ENST00000421085 DEUP1Q05D60 604 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 PCGF5Q86SE9 256 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 CFAP43Q8NDM7 1665 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 ALKBH5Q6P6C2 394 aaKnown RBP13.32□□□□□ -0.28
CLCN4-203ENST00000421085 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 CRLF3Q8IUI8 442 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 GOLPH3LQ9H4A5 285 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 SMYD3Q9H7B4 428 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 COPRSQ9NQ92 184 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 TLK1Q9UKI8 766 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 KDM5DQ9BY66 1539 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 hCG_2014768A0A024R1R8 64 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 CENPUQ71F23 418 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 DEPDC1BQ8WUY9 529 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 TTC17Q96AE7 1141 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 RASA4BC9J798 803 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 PODXLO00592 558 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
CLCN4-203ENST00000421085 RASA4O43374 803 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 POLA2Q14181 598 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 MCF2P10911 925 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
CLCN4-203ENST00000421085 GAP43P17677 238 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 PLCG1P19174 1290 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 PHKA1P46020 1223 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 C1orf146Q5VVC0 180 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 SIRT2Q8IXJ6 389 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms