RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 IGLV3-22A0A075B6J6 115 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 FAM170AA1A519 330 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 ABCB11O95342 1321 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 SLU7O95391 586 aaKnown RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 TPM1P09493 284 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 CYP27A1Q02318 531 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 EHHADHQ08426 723 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 AP3B2Q13367 1082 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 FAM26FQ5R3K3 315 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 PDCL2Q8N4E4 241 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 NLGN2Q8NFZ4 835 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 IL31RAQ8NI17 732 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 ANKRD7Q92527 254 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 RUSC1Q9BVN2 902 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 MMRN2Q9H8L6 949 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 WRAP73Q9P2S5 460 aaPredicted RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 LUC7L2Q9Y383 392 aaKnown RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 REXO2Q9Y3B8 237 aaKnown RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 ARFGEF1Q9Y6D6 1849 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 PVALEFA0A1B0GWK0 134 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 SLC12A3P55017 1021 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 ZNF569Q5MCW4 686 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 MAEAQ7L5Y9 396 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 KRT26Q7Z3Y9 468 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 MYOCDQ8IZQ8 938 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 ZNF526Q8TF50 670 aaPredicted RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 SCFD1Q8WVM8 642 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 REEP2Q9BRK0 252 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 RAVER2Q9HCJ3 691 aaKnown RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 VAV3Q9UKW4 847 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 DUSP10Q9Y6W6 482 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 BRCA2P51587 3418 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 ITIH6Q6UXX5 1313 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 POLR2MP0CAP2 368 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 CASQ1P31415 396 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 LRRC55Q6ZSA7 311 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 ZBED3Q96IU2 234 aaPredicted RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 MBOAT7Q96N66 472 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 EIF2AK1Q9BQI3 630 aaKnown RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 FHDC1Q9C0D6 1143 aaPredicted RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 PDCL3Q9H2J4 239 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 L2HGDHQ9H9P8 463 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 CNOT7Q9UIV1 285 aaKnown RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 HACL1Q9UJ83 578 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 TULP1O00294 542 aaPredicted RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 PEX10O60683 326 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 PRPF6O94906 941 aaKnown RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 ALAS1P13196 640 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 DNM2P50570 870 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 MTMR2Q13614 643 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 SLFN12Q8IYM2 578 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 GUF1Q8N442 669 aaKnown RBP9.77□□□□□ -0.85
SNCA-206ENST00000420646 OR8K1Q8NGG5 319 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 NDST4Q9H3R1 872 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 CCPG1Q9ULG6 757 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 GUCA1BQ9UMX6 200 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 PCDHA2Q9Y5H9 948 aa9.77□□□□□ -0.85
SNCA-206ENST00000420646 ZNF536O15090 1300 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 RCCD1A6NED2 376 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 ASNSP08243 561 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 MYBP10242 640 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 SPP2Q13103 211 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 GIT2Q14161 759 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 ENOX2Q16206 610 aaKnown RBP9.76□□□□□ -0.85
SNCA-206ENST00000420646 GPR162Q16538 588 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 Q4G0T1 1027 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 MUM1L1Q5H9M0 696 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 SFR1Q86XK3 245 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 CHURC1Q8WUH1 139 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 HOOK2Q96ED9 719 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 DYDC2Q96IM9 177 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 NT5C3AQ9H0P0 336 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 RANBP17Q9H2T7 1088 aaKnown RBP9.76□□□□□ -0.85
SNCA-206ENST00000420646 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 DNM3Q9UQ16 869 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 KIF2AO00139 706 aaPredicted RBP9.76□□□□□ -0.85
SNCA-206ENST00000420646 ENC1O14682 589 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 MMP14P50281 582 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 VWA3BQ502W6 1294 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 ARHGAP29Q52LW3 1261 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 LRCH2Q5VUJ6 765 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 CYP26C1Q6V0L0 522 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 OTOP1Q7RTM1 612 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 FAM83AQ86UY5 434 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 SLC16A10Q8TF71 515 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 WDR11Q9BZH6 1224 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 TTYH3Q9C0H2 523 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 NLRC4Q9NPP4 1024 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 CAPN11Q9UMQ6 739 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 EPN1Q9Y6I3 576 aaPredicted RBP9.76□□□□□ -0.85
SNCA-206ENST00000420646 SORBS3O60504 671 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 FLOT1O75955 427 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms