RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 STK3Q13188 491 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 MFSD10Q14728 455 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 KIAA0753Q2KHM9 967 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 MXRA8Q9BRK3 442 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 GLT8D2Q9H1C3 349 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 MLXIPQ9HAP2 919 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 HDAC6Q9UBN7 1215 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 GTF2IRD1Q9UHL9 959 aa23.6■■□□□ 1.37
PKNOX1-202ENST00000418336 MEIS1O00470 390 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 PFKFB2O60825 505 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 LARGE1O95461 756 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 LGALS2P05162 132 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 SUPT20HL2P0C7V6 817 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 MTMR1Q13613 665 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 TMEM240Q5SV17 173 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 AIFM3Q96NN9 605 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 KIF2CQ99661 725 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 VPS54Q9P1Q0 977 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 SCN5AQ14524 2016 aa23.59■■□□□ 1.37
PKNOX1-202ENST00000418336 IGLV3-22A0A075B6J6 115 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 FAM86B1E9PN63 330 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 M0R2N6 131 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 CYP3A4P08684 503 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 FAM86B2P0C5J1 330 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 ARP10275 920 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 CCL23P55773 120 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 RBL2Q08999 1139 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 GPNMBQ14956 572 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 FAM47CQ5HY64 1035 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 JAKMIP3Q5VZ66 844 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 WNT8BQ93098 351 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 SH3GLB2Q9NR46 395 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 KCNH7Q9NS40 1196 aa23.58■■□□□ 1.37
PKNOX1-202ENST00000418336 GSTTP1A0A1W2PQM5 241 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 RBAK-RBAKDNI3L0D1 243 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 MAFGO15525 162 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 DTNBO60941 627 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 ARHGAP4P98171 946 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 ST3GAL1Q11201 340 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 ITGB3BPQ13352 177 aaPredicted RBP23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 PPIGQ13427 754 aaKnown RBP eCLIP23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 TRIM71Q2Q1W2 868 aaKnown RBP23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 CEP55Q53EZ4 464 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 GPR153Q6NV75 609 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 TMEM199Q8N511 208 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 RASGRP4Q8TDF6 673 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 SCLYQ96I15 445 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 CDHR1Q96JP9 859 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 ALG1Q9BT22 464 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 KATNAL1Q9BW62 490 aa23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 TRIP12Q14669 1992 aaPredicted RBP23.57■■□□□ 1.36
PKNOX1-202ENST00000418336 ACRP10323 421 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 ZNF200P98182 395 aaPredicted RBP23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 PTGISQ16647 500 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 ME3Q16798 604 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 TRAF7Q6Q0C0 670 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 TRIM50Q86XT4 487 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 EHMT1Q9H9B1 1298 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 C6orf50Q9HD87 102 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 IL23AQ9NPF7 189 aa23.56■■□□□ 1.36
PKNOX1-202ENST00000418336 H3BRB1 525 aa23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 PITPNM1O00562 1244 aa23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 SSRP1Q08945 709 aaKnown RBP23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 ZNF365Q70YC5 407 aa23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 NIPA1Q7RTP0 329 aa23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 GIMAP8Q8ND71 665 aaPredicted RBP23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 CCDC12Q8WUD4 166 aaPredicted RBP23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 PCYT2Q99447 389 aa23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 TUT1Q9H6E5 874 aaKnown RBP23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 AGO4Q9HCK5 861 aaKnown RBP23.55■■□□□ 1.36
PKNOX1-202ENST00000418336 DHX15O43143 795 aaKnown RBP23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 DEXIO95424 95 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 ADAM17P78536 824 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 REXO1Q8N1G1 1221 aaKnown RBP23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 C7orf31Q8N865 590 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 LENG9Q96B70 501 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 PKD2L1Q9P0L9 805 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 NFASCO94856 1347 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 STK36Q9NRP7 1315 aa23.54■■□□□ 1.36
PKNOX1-202ENST00000418336 TET1Q8NFU7 2136 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 IQCF3P0C7M6 154 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 FDPSP14324 419 aaKnown RBP23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 GNA11P29992 359 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 CIITAP33076 1130 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 CHMP4BP1P59074 171 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 AKAP17AQ02040 695 aaKnown RBP23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 FAM109BQ6ICB4 259 aaPredicted RBP23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 DAGLBQ8NCG7 672 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 CCDC148Q8NFR7 591 aa23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
PKNOX1-202ENST00000418336 NOP56O00567 594 aaKnown RBP23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 EIF5BO60841 1220 aaKnown RBP23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 LGR5O75473 907 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 SMIM10L2AP0DMW4 78 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 SMIM10L2BP0DMW5 78 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 TCF7P36402 384 aaPredicted RBP23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 SP4Q02446 784 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 ANKRD1Q15327 319 aa23.52■■□□□ 1.36
PKNOX1-202ENST00000418336 MCTP2Q6DN12 878 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms