RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PARVGQ9HBI0 331 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 SLC13A4Q9UKG4 626 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 PRPSAP2O60256 369 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 ATP1A2P50993 1020 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 PIDD1Q9HB75 910 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 K7ERI5 159 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 GSTA4O15217 222 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 MX2P20592 715 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 STX1BP61266 288 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 ATP6V1E1P36543 226 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 GOLGA8FQ08AF8 430 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 GOLGA8DPQ0D2H9 430 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 URGCPQ8TCY9 931 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 CPSF2Q9P2I0 782 aaKnown RBP12.14□□□□□ -0.47
PTCH1-205ENST00000418258 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
PTCH1-205ENST00000418258 MMP10P09238 476 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 CMA1P23946 247 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 LTKP29376 864 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 CLNS1AP54105 237 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 FOXD4Q12950 439 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 BAIAP2L1Q9UHR4 511 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 GCFC2P16383 781 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 CDO1Q16878 200 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SGO2Q562F6 1265 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 KIF24Q5T7B8 1368 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SPATA1Q5VX52 437 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SZRD1Q7Z422 152 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 MRPL47Q9HD33 250 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 EIF2AK2P19525 551 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 PPARGP37231 505 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 PIGSQ96S52 555 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 EFCAB6Q5THR3 1501 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SART1O43290 800 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 MAP3K7O43318 606 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 RECQLP46063 649 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 LRRC41Q15345 812 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SEPT12Q8IYM1 358 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 Q9H521 79 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 KRT1P04264 644 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 HOXD10P28358 340 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 PHEXP78562 749 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 HSPH1Q92598 858 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 CFAP36Q96G28 342 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 HACD3Q9P035 362 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 TLK1Q9UKI8 766 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 BASP1P80723 227 aaKnown RBP12.13□□□□□ -0.47
PTCH1-205ENST00000418258 RCN2Q14257 317 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 SURF1Q15526 300 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 DEPDC1BQ8WUY9 529 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 HPCAL4Q9UM19 191 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
PTCH1-205ENST00000418258 NEMP1O14524 444 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 LLGL1Q15334 1064 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 PPWD1Q96BP3 646 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 EVI5O60447 810 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 SSH3Q8TE77 659 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 NUDCD1Q96RS6 583 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 INSRP06213 1382 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 DPYSL4O14531 572 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 UBE2SQ16763 222 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 OR6B2Q6IFH4 312 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 FAM160B2Q86V87 743 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 SPECC1L-ADORA2AF8WAN1 911 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 CFAP61Q8NHU2 1237 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 MSTO1Q9BUK6 570 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 TCP1P17987 556 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 CATSPER4Q7RTX7 472 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 ABCC12Q96J65 1359 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 MECOMQ03112 1051 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 KLC3Q6P597 504 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms