RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 MYCNP04198 464 aaPredicted RBP19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 MMP3P08254 477 aa19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 GCFC2P16383 781 aaKnown RBP19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 U2AF2P26368 475 aaKnown RBP eCLIP19.91■□□□□ 0.782e-8■■■□□ 15.6
COMMD3-BMI1-201ENST00000417470 PURAQ00577 322 aaKnown RBP19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 SNX17Q15036 470 aa19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 DGKDQ16760 1214 aa19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 HSDL1Q3SXM5 330 aa19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 CYFIP1Q7L576 1253 aa19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 SPATA33Q96N06 139 aa19.91■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 GUCY1B3Q02153 619 aa19.9■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 PRR16Q569H4 304 aa19.9■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 SLC39A5Q6ZMH5 540 aa19.9■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 BCAS3Q9H6U6 928 aa19.9■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 TBC1D22BQ9NU19 505 aa19.9■□□□□ 0.78
COMMD3-BMI1-201ENST00000417470 DHX15O43143 795 aaKnown RBP19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 PDCP20941 246 aa19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 FOSBP53539 338 aa19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 MLLT1Q03111 559 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ITGB3BPQ13352 177 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 LARP1BQ659C4 914 aaKnown RBP19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SLC43A3Q8NBI5 491 aa19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 GPR20Q99678 358 aa19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SDF4Q9BRK5 362 aa19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 MTG1Q9BT17 334 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 STARD7Q9NQZ5 370 aa19.89■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 IPO5O00410 1097 aaKnown RBP19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 CDK7P50613 346 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 LETM2Q2VYF4 491 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 CXCL17Q6UXB2 119 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 NOSTRINQ8IVI9 506 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SEPT1Q8WYJ6 367 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 FERMT2Q96AC1 680 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ZNF577Q9BSK1 485 aa19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 JPH1Q9HDC5 661 aaPredicted RBP19.88■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 DNAH12Q6ZR08 3092 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 A0A0U1RQG5 324 aaPredicted RBP19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 NOP56O00567 594 aaKnown RBP19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 TBX3O15119 743 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 MSH4O15457 936 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 TDP2O95551 362 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 MYL3P08590 195 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 TRAPPC10P48553 1259 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SLC5A5Q92911 643 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 RIT2Q99578 217 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SLC9A2Q9UBY0 812 aa19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 DDX25Q9UHL0 483 aaKnown RBP19.87■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 FAM205CA6NFA0 338 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 H3BQV1 296 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ARVCFO00192 962 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ATG7O95352 703 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ORC2Q13416 577 aaPredicted RBP19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 LRRC26Q2I0M4 334 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ETNPPLQ8TBG4 499 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 KAT2BQ92831 832 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 TOX2Q96NM4 488 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 KCNMB3Q9NPA1 279 aa19.86■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 GRIN2DO15399 1336 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 GSTTP1A0A1W2PQM5 241 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 HAS3O00219 553 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 CCNT1O60563 726 aaKnown RBP19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 F2P00734 622 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 PDIA4P13667 645 aaKnown RBP19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 PTPN11Q06124 597 aaPredicted RBP19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ITGA7Q13683 1181 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ANKRD33Q7Z3H0 272 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 FAM20AQ96MK3 541 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 C16orf70Q9BSU1 422 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 KATNAL1Q9BW62 490 aa19.85■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 MROH7Q68CQ1 1323 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SORBS3O60504 671 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 PSMD10O75832 226 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ATN1P54259 1190 aaPredicted RBP19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 KRT76Q01546 638 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 GNL2Q13823 731 aaKnown RBP19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ZNF746Q6NUN9 644 aaPredicted RBP19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 NFRKBQ6P4R8 1299 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SESTD1Q86VW0 696 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 VTI1AQ96AJ9 217 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 PKD2L1Q9P0L9 805 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SCN10AQ9Y5Y9 1956 aa19.84■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 IGKV6D-21A0A0A0MT36 114 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SLC37A4O43826 429 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 LGR5O75473 907 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 LGALS2P05162 132 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SYT1P21579 422 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 TCF7P36402 384 aaPredicted RBP19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 RTP1P59025 263 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 ACTR2P61160 394 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 B3GNT9Q6UX72 402 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 SMAP1Q8IYB5 467 aaPredicted RBP19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 TELO2Q9Y4R8 837 aa19.83■□□□□ 0.77
COMMD3-BMI1-201ENST00000417470 EMSYQ7Z589 1322 aa19.82■□□□□ 0.76
COMMD3-BMI1-201ENST00000417470 TNRC18O15417 2968 aaPredicted RBP19.82■□□□□ 0.76
COMMD3-BMI1-201ENST00000417470 CCNE2O96020 404 aa19.82■□□□□ 0.76
COMMD3-BMI1-201ENST00000417470 ABHD15Q6UXT9 468 aa19.82■□□□□ 0.76
COMMD3-BMI1-201ENST00000417470 RDM1Q8NG50 284 aa19.82■□□□□ 0.76
COMMD3-BMI1-201ENST00000417470 DPF3Q92784 378 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms