RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.03□□□□□ -0.64
LINC00494-201ENST00000416742 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 AKR1B10O60218 316 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 EHHADHQ08426 723 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 HAUS3Q68CZ6 603 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 NEK11Q8NG66 645 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 CAPZA3Q96KX2 299 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 COL4A3BPQ9Y5P4 624 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 FHOD1Q9Y613 1164 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 QSER1Q2KHR3 1735 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 NRXN2Q9P2S2 1712 aa11.03□□□□□ -0.64
LINC00494-201ENST00000416742 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 FOSP01100 380 aaPredicted RBP11.02□□□□□ -0.64
LINC00494-201ENST00000416742 CYP3A7P24462 503 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 FAM83BQ5T0W9 1011 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 CCDC84Q86UT8 332 aaPredicted RBP11.02□□□□□ -0.64
LINC00494-201ENST00000416742 OGFOD1Q8N543 542 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 PDGFDQ9GZP0 370 aaPredicted RBP11.02□□□□□ -0.64
LINC00494-201ENST00000416742 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 ARFGAP3Q9NP61 516 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 ZNF277Q9NRM2 450 aaPredicted RBP11.02□□□□□ -0.64
LINC00494-201ENST00000416742 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.64
LINC00494-201ENST00000416742 SIK3Q9Y2K2 1263 aa11.02□□□□□ -0.64
LINC00494-201ENST00000416742 EIF3CLB5ME19 914 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 SRGAP2O75044 1071 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 KIF5AQ12840 1032 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 HYIQ5T013 277 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 CCDC170Q8IYT3 715 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 EIF3CQ99613 913 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 SCAF8Q9UPN6 1271 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 LRRC53A6NM62 1247 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 PSMD14O00487 310 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 CHMP2AO43633 222 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 ATP1A1P05023 1023 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 EIF4A3P38919 411 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 STAT2P52630 851 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 TUBB2AQ13885 445 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 ENOX2Q16206 610 aaKnown RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 ARSHQ5FYA8 562 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 CC2D1AQ6P1N0 951 aaPredicted RBP11.02□□□□□ -0.65
LINC00494-201ENST00000416742 ETNPPLQ8TBG4 499 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 TUBB2BQ9BVA1 445 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 HDAC9Q9UKV0 1011 aa11.02□□□□□ -0.65
LINC00494-201ENST00000416742 A0A1W2PQJ5 194 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 MSH4O15457 936 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 ZRANB2O95218 330 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00494-201ENST00000416742 ADAM9Q13443 819 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 WHAMMP3Q1A5X7 153 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
LINC00494-201ENST00000416742 FIGNQ5HY92 759 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 KIAA1755Q5JYT7 1200 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 ZNF70Q9UC06 446 aaPredicted RBP11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SPDYE2BA6NHP3 402 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SPDYE6P0CI01 402 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SREBF1P36956 1147 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 EPS15P42566 896 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
LINC00494-201ENST00000416742 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SCFD1Q8WVM8 642 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 PLAGL2Q9UPG8 496 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00494-201ENST00000416742 KIF20AO95235 890 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SLC12A3P55017 1021 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 MOXD1Q6UVY6 613 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 TTLL6Q8N841 843 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 MBOAT7Q96N66 472 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 BHMT2Q9H2M3 363 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SAR1BQ9Y6B6 198 aa11.01□□□□□ -0.65
LINC00494-201ENST00000416742 SFI1A8K8P3 1242 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 OPLAHO14841 1288 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 ZNF263O14978 683 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 POLR3GO15318 223 aaPredicted RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 USO1O60763 962 aaKnown RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 PRPF6O94906 941 aaKnown RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 PLA2G4AP47712 749 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 KIF11P52732 1056 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 APBA1Q02410 837 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 ARID5AQ03989 594 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 KCNMA1Q12791 1236 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 MCTP2Q6DN12 878 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 ZNF771Q7L3S4 317 aaPredicted RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 SFR1Q86XK3 245 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 ANKRD13CQ8N6S4 541 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 NOA1Q8NC60 698 aaKnown RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 LENG9Q96B70 501 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 LSM14BQ9BX40 385 aaKnown RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 IFIH1Q9BYX4 1025 aaKnown RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 TMEM39BQ9GZU3 492 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 JADE2Q9NQC1 790 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 HERC5Q9UII4 1024 aaKnown RBP11□□□□□ -0.65
LINC00494-201ENST00000416742 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 CETN3O15182 167 aa11□□□□□ -0.65
LINC00494-201ENST00000416742 SPATA31C1P0DKV0 1188 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms