RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 CNKSR3Q6P9H4 555 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 CDHR1Q96JP9 859 aa20.2■□□□□ 0.82
PDLIM2-208ENST00000416159 ZBTB43O43298 467 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 NBNO60934 754 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 HIC1Q14526 733 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 RTN1Q16799 776 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 ZNF618Q5T7W0 954 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 SERINC5Q86VE9 423 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 HERC6Q8IVU3 1022 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 TEX2Q8IWB9 1127 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 ATP6V0A1Q93050 837 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 TCEANC2Q96MN5 208 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 EHMT1Q9H9B1 1298 aa20.19■□□□□ 0.82
PDLIM2-208ENST00000416159 SMIM10L2AP0DMW4 78 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 SMIM10L2BP0DMW5 78 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 GNAT1P11488 350 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 HOXC8P31273 242 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 ADGRE1Q14246 886 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 UBE2SQ16763 222 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 WNT8BQ93098 351 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 RNPEPQ9H4A4 650 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 ZNF215Q9UL58 517 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 BRPF3Q9ULD4 1205 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 PCDHA6Q9UN73 950 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 PCDHA8Q9Y5H6 950 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 UBIAD1Q9Y5Z9 338 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 CNTNAP5Q8WYK1 1306 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 DOCK5Q9H7D0 1870 aa20.18■□□□□ 0.82
PDLIM2-208ENST00000416159 ABHD14A-ACY1A0A1B0GW23 586 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 MAFGO15525 162 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 EFCAB14O75071 495 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 CA3P07451 260 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 IGFBP4P22692 258 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 RCAN1P53805 252 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 WDR5P61964 334 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 UTP14CQ5TAP6 766 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 USP38Q8NB14 1042 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 KCNB2Q92953 911 aa20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 COL25A1Q9BXS0 654 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-208ENST00000416159 KAT6AQ92794 2004 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 KLF18A0A0U1RQI7 1052 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 GOLGA8AA7E2F4 631 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 RSPH10B2B2RC85 870 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 hCG_1984214I3L0E3 225 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 RSPH10BP0C881 870 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 ITGB5P18084 799 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 THPOP40225 353 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 SP4Q02446 784 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 FUT2Q10981 343 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 IKBKEQ14164 716 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 PPP1R18Q6NYC8 613 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 ZNF713Q8N859 430 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 JADE2Q9NQC1 790 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
PDLIM2-208ENST00000416159 TREHO43280 583 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 ATP9AO75110 1047 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 CAND2O75155 1236 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 KCNA2P16389 499 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 NAPAP54920 295 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 FGD1P98174 961 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 MTMR1Q13613 665 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 PPM1EQ8WY54 764 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 SEPT1Q8WYJ6 367 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 GLT8D2Q9H1C3 349 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
PDLIM2-208ENST00000416159 TLL1O43897 1013 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 LGR5O75473 907 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 FOSP01100 380 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 HSPA4P34932 840 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 MBTPS1Q14703 1052 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 TRIM50Q86XT4 487 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 ZBED2Q9BTP6 218 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 FAM217BQ9NTX9 383 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 SETD4Q9NVD3 440 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 TELO2Q9Y4R8 837 aa20.14■□□□□ 0.81
PDLIM2-208ENST00000416159 NRCAMQ92823 1304 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 CCDC196A0A1B0GTZ2 297 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 CDC27P30260 824 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 TCF7P36402 384 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 ADCY7P51828 1080 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 TAP1Q03518 808 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 MXRA8Q9BRK3 442 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 BARHL2Q9NY43 387 aa20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 NAP1L2Q9ULW6 460 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-208ENST00000416159 CDH23Q9H251 3354 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 CUL9Q8IWT3 2517 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 GSTTP1A0A1W2PQM5 241 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 SMCO2A6NFE2 343 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 STXBP3O00186 592 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 ADAM17P78536 824 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 DEFB103AP81534 67 aa20.12■□□□□ 0.81
PDLIM2-208ENST00000416159 ARHGAP4P98171 946 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms