RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 LMCD1Q9NZU5 365 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 MTCH2Q9Y6C9 303 aa19.23■□□□□ 0.67
SF1-207ENST00000413951 C17orf102A2RUQ5 167 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 FIBPO43427 364 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 CYTH3O43739 400 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 CALM1P0DP23 149 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 CALM2P0DP24 149 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 CALM3P0DP25 149 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 ICAM3P32942 547 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 LIFRP42702 1097 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 RBM25P49756 843 aaKnown RBP19.22■□□□□ 0.67
SF1-207ENST00000413951 METTL7BQ6UX53 244 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 UHRF1Q96T88 793 aaPredicted RBP19.22■□□□□ 0.67
SF1-207ENST00000413951 LY9Q9HBG7 655 aa19.22■□□□□ 0.67
SF1-207ENST00000413951 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
SF1-207ENST00000413951 NBNO60934 754 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 LGR5O75473 907 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 GJB5O95377 273 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 RPS6KB1P23443 525 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 BLOC1S2Q6QNY1 142 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 NLRX1Q86UT6 975 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 SERINC5Q86VE9 423 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 GBF1Q92538 1859 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 ATP6V0A1Q93050 837 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 CDHR1Q96JP9 859 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 INPP4AQ96PE3 977 aaPredicted RBP19.21■□□□□ 0.67
SF1-207ENST00000413951 C16orf70Q9BSU1 422 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 AGXT2Q9BYV1 514 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 CERS4Q9HA82 394 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 FRMPD4Q14CM0 1322 aa19.21■□□□□ 0.67
SF1-207ENST00000413951 MYO9BQ13459 2157 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 RSPH10B2B2RC85 870 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 SPATA31C2B4DYI2 1134 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 PIK3CDO00329 1044 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 AMHP03971 560 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 RSPH10BP0C881 870 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 THPOP40225 353 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 SP2Q02086 613 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 GPNMBQ14956 572 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 ZNF618Q5T7W0 954 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 NFXL1Q6ZNB6 911 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 SGMS1Q86VZ5 419 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 IL31RAQ8NI17 732 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 SENP7Q9BQF6 1050 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 C22orf23Q9BZE7 217 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 INSL6Q9Y581 213 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 SCN5AQ14524 2016 aa19.2■□□□□ 0.66
SF1-207ENST00000413951 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
SF1-207ENST00000413951 LGALS2P05162 132 aa19.19■□□□□ 0.66
SF1-207ENST00000413951 CPA1P15085 419 aa19.19■□□□□ 0.66
SF1-207ENST00000413951 TRIM71Q2Q1W2 868 aaKnown RBP19.19■□□□□ 0.66
SF1-207ENST00000413951 PCNX4Q63HM2 1172 aa19.19■□□□□ 0.66
SF1-207ENST00000413951 RUFY3Q7L099 469 aa19.19■□□□□ 0.66
SF1-207ENST00000413951 KIF2CQ99661 725 aa19.19■□□□□ 0.66
SF1-207ENST00000413951 CHD9Q3L8U1 2897 aa19.18■□□□□ 0.66
SF1-207ENST00000413951 SEPT8Q92599 483 aa19.18■□□□□ 0.66
SF1-207ENST00000413951 TCEANC2Q96MN5 208 aa19.18■□□□□ 0.66
SF1-207ENST00000413951 TBC1D32Q96NH3 1257 aa19.18■□□□□ 0.66
SF1-207ENST00000413951 TGS1Q96RS0 853 aaKnown RBP19.18■□□□□ 0.66
SF1-207ENST00000413951 LRRC2Q9BYS8 371 aa19.18■□□□□ 0.66
SF1-207ENST00000413951 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
SF1-207ENST00000413951 RFXAPO00287 272 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 SORBS3O60504 671 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 SMIM10L2AP0DMW4 78 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 SMIM10L2BP0DMW5 78 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 HOXC8P31273 242 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 DEFB103AP81534 67 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 MRPS9P82933 396 aaKnown RBP19.17■□□□□ 0.66
SF1-207ENST00000413951 GRB10Q13322 594 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 SLC35G1Q2M3R5 365 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 CYFIP1Q7L576 1253 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 TEX2Q8IWB9 1127 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 PIBF1Q8WXW3 757 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 HLA-CQ95604 372 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 UPF3BQ9BZI7 483 aaKnown RBP19.17■□□□□ 0.66
SF1-207ENST00000413951 CYP46A1Q9Y6A2 500 aa19.17■□□□□ 0.66
SF1-207ENST00000413951 ERVK-21P61565 698 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 ZNF200P98182 395 aaPredicted RBP19.16■□□□□ 0.66
SF1-207ENST00000413951 TRAF7Q6Q0C0 670 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 SYNE3Q6ZMZ3 975 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 APBB2Q92870 758 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 SAMD11Q96NU1 681 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 GPR20Q99678 358 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 RNPEPQ9H4A4 650 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 PSTPIP2Q9H939 334 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 EHMT1Q9H9B1 1298 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 RTEL1Q9NZ71 1219 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 SLC12A7Q9Y666 1083 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 TTC28Q96AY4 2481 aa19.16■□□□□ 0.66
SF1-207ENST00000413951 SPTBN5Q9NRC6 3674 aaKnown RBP19.16■□□□□ 0.66
SF1-207ENST00000413951 MAFGO15525 162 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 RPLP2P05387 115 aaKnown RBP19.15■□□□□ 0.66
SF1-207ENST00000413951 BMP1P13497 986 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 EVCP57679 992 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 PLEKHG4Q58EX7 1191 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 DBF4BQ8NFT6 615 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 GPKOWQ92917 476 aaPredicted RBP eCLIP19.15■□□□□ 0.663e-7■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms