RNA–Protein interactions for RNA: ENST00000412759.2

SRGAP2C-203, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-203ENST00000412759 HMGB1P09429 215 aaKnown RBP18.32■□□□□ 0.52
SRGAP2C-203ENST00000412759 GRB10Q13322 594 aa18.32■□□□□ 0.52
SRGAP2C-203ENST00000412759 GPNMBQ14956 572 aa18.32■□□□□ 0.52
SRGAP2C-203ENST00000412759 GNPTABQ3T906 1256 aa18.32■□□□□ 0.52
SRGAP2C-203ENST00000412759 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
SRGAP2C-203ENST00000412759 MEIS2O14770 477 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 NBNO60934 754 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 GGPS1O95749 300 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 IL31RAQ8NI17 732 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 PIBF1Q8WXW3 757 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 DHX38Q92620 1227 aaKnown RBP18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 KCNB2Q92953 911 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 INPP4AQ96PE3 977 aaPredicted RBP18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 TGS1Q96RS0 853 aaKnown RBP18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 RBM28Q9NW13 759 aaKnown RBP18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 INSL6Q9Y581 213 aa18.31■□□□□ 0.52
SRGAP2C-203ENST00000412759 EPOPA6NHQ4 379 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 SPATA31C2B4DYI2 1134 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 ZNF286BP0CG31 522 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 GNAT1P11488 350 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 MRPS9P82933 396 aaKnown RBP18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 SP2Q02086 613 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 NEDD9Q14511 834 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 HSDL1Q3SXM5 330 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 ZNF618Q5T7W0 954 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 TMTC3Q6ZXV5 915 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 SMARCC2Q8TAQ2 1214 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
SRGAP2C-203ENST00000412759 RSPH10B2B2RC85 870 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 H3BRB1 525 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 NOP56O00567 594 aaKnown RBP18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 LGR5O75473 907 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 AMHP03971 560 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 RSPH10BP0C881 870 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 THPOP40225 353 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 KCNQ1P51787 676 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 RCAN1P53805 252 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 ERVK-21P61565 698 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 APOA5Q6Q788 366 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 USP17L6PQ6QN14 398 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 SENP7Q9BQF6 1050 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 TUT1Q9H6E5 874 aaKnown RBP18.29■□□□□ 0.52
SRGAP2C-203ENST00000412759 BDP1A6H8Y1 2624 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 MYH7BA7E2Y1 1941 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 C17orf102A2RUQ5 167 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 FIBPO43427 364 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 UBA1P22314 1058 aaKnown RBP18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 DEFB103AP81534 67 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 TRIM71Q2Q1W2 868 aaKnown RBP18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 KRT40Q6A162 431 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 SERINC5Q86VE9 423 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 CMTR1Q8N1G2 835 aaKnown RBP18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 REV3LO60673 3130 aa18.28■□□□□ 0.52
SRGAP2C-203ENST00000412759 LCHNA4D1U4 455 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 ZBTB43O43298 467 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 LPXNO60711 386 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 ARHGEF15O94989 841 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 RXRAP19793 462 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 METTL7BQ6UX53 244 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 MICU3Q86XE3 530 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 FBXL16Q8N461 479 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 CDHR1Q96JP9 859 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 NECAB3Q96P71 396 aaPredicted RBP18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 C16orf70Q9BSU1 422 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 SUGCTQ9HAC7 445 aa18.27■□□□□ 0.52
SRGAP2C-203ENST00000412759 LINC01553A4QN01 128 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 MAFGO15525 162 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 SORBS3O60504 671 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 CAND2O75155 1236 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 TMCO2Q7Z6W1 182 aaPredicted RBP18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 SEPT8Q92599 483 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 MTUS1Q9ULD2 1270 aa18.26■□□□□ 0.51
SRGAP2C-203ENST00000412759 hCG_1984214I3L0E3 225 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 REC8O95072 547 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 HSPA4P34932 840 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 RTN1Q16799 776 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 PTPROQ16827 1216 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 FAM117BQ6P1L5 589 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 TRAF7Q6Q0C0 670 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 ZNF713Q8N859 430 aaPredicted RBP18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 DBF4BQ8NFT6 615 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 GPKOWQ92917 476 aaPredicted RBP eCLIP18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 GPRASP2Q96D09 838 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 SAMD11Q96NU1 681 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 RTEL1Q9NZ71 1219 aa18.25■□□□□ 0.51
SRGAP2C-203ENST00000412759 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms