RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 FGFBP2Q9BYJ0 223 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 PDCL3Q9H2J4 239 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 MEIS1O00470 390 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 KLK7P49862 253 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 RAD51AP2Q09MP3 1159 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 ZCWPW2Q504Y3 356 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 NUP58Q9BVL2 599 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 TBC1D7Q9P0N9 293 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 RASSF10A6NK89 507 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 KRT18P05783 430 aaKnown RBP27.26■■□□□ 1.95
VRK2-202ENST00000412104 FKBP15Q5T1M5 1219 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 RETREG2Q8NC44 543 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 ACRBPQ8NEB7 543 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 EHMT1Q9H9B1 1298 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 LZTFL1Q9NQ48 299 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 DNM3Q9UQ16 869 aa27.26■■□□□ 1.95
VRK2-202ENST00000412104 RBBP6Q7Z6E9 1792 aaKnown RBP27.25■■□□□ 1.95
VRK2-202ENST00000412104 A0A0U1RQJ8 604 aa27.25■■□□□ 1.95
VRK2-202ENST00000412104 TRIM21P19474 475 aaKnown RBP27.25■■□□□ 1.95
VRK2-202ENST00000412104 INPP5BP32019 993 aa27.25■■□□□ 1.95
VRK2-202ENST00000412104 PABPC4Q13310 644 aaKnown RBP eCLIP27.25■■□□□ 1.95
VRK2-202ENST00000412104 VWA3BQ502W6 1294 aa27.25■■□□□ 1.95
VRK2-202ENST00000412104 HERC4Q5GLZ8 1057 aaPredicted RBP27.25■■□□□ 1.95
VRK2-202ENST00000412104 SYT2Q8N9I0 419 aaPredicted RBP27.25■■□□□ 1.95
VRK2-202ENST00000412104 ATRIPQ8WXE1 791 aa27.25■■□□□ 1.95
VRK2-202ENST00000412104 BCS1LQ9Y276 419 aa27.25■■□□□ 1.95
VRK2-202ENST00000412104 EML1O00423 815 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 CASQ1P31415 396 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 GMPSP49915 693 aaPredicted RBP27.24■■□□□ 1.95
VRK2-202ENST00000412104 UBXN2AP68543 259 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 CYP4A11Q02928 519 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 MAN2A1Q16706 1144 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 MICALL2Q8IY33 904 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 POLR3CQ9BUI4 534 aaPredicted RBP27.24■■□□□ 1.95
VRK2-202ENST00000412104 CHP1Q99653 195 aa27.24■■□□□ 1.95
VRK2-202ENST00000412104 EIF2AK1Q9BQI3 630 aaKnown RBP27.24■■□□□ 1.95
VRK2-202ENST00000412104 WDR46O15213 610 aaKnown RBP27.23■■□□□ 1.95
VRK2-202ENST00000412104 URI1O94763 535 aaPredicted RBP27.23■■□□□ 1.95
VRK2-202ENST00000412104 ICAM1P05362 532 aa27.23■■□□□ 1.95
VRK2-202ENST00000412104 SAMD7Q7Z3H4 446 aa27.23■■□□□ 1.95
VRK2-202ENST00000412104 PCMTD1Q96MG8 357 aaPredicted RBP27.23■■□□□ 1.95
VRK2-202ENST00000412104 NDST4Q9H3R1 872 aa27.23■■□□□ 1.95
VRK2-202ENST00000412104 AGPAT5Q9NUQ2 364 aa27.23■■□□□ 1.95
VRK2-202ENST00000412104 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.23■■□□□ 1.95
VRK2-202ENST00000412104 CCPG1Q9ULG6 757 aa27.23■■□□□ 1.95
VRK2-202ENST00000412104 V9GYY5 206 aaPredicted RBP27.23■■□□□ 1.95
VRK2-202ENST00000412104 ZNF536O15090 1300 aa27.23■■□□□ 1.95
VRK2-202ENST00000412104 ASTN2O75129 1339 aaPredicted RBP27.23■■□□□ 1.95
VRK2-202ENST00000412104 RASSF7Q02833 373 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 GIT2Q14161 759 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 LRCH2Q5VUJ6 765 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 LPAR1Q92633 364 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 SLC5A5Q92911 643 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 AGBL1Q96MI9 1066 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 IRX2Q9BZI1 471 aaPredicted RBP27.22■■□□□ 1.95
VRK2-202ENST00000412104 DEFB129Q9H1M3 183 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 LTBP3Q9NS15 1303 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 PSMD10O75832 226 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 FKBP3Q00688 224 aaKnown RBP27.22■■□□□ 1.95
VRK2-202ENST00000412104 TSR1Q2NL82 804 aaKnown RBP27.22■■□□□ 1.95
VRK2-202ENST00000412104 FIGNQ5HY92 759 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 WDR59Q6PJI9 974 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 OTOP1Q7RTM1 612 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 SCFD1Q8WVM8 642 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 SLF1Q9BQI6 1058 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 KIAA1683Q9H0B3 1180 aa27.22■■□□□ 1.95
VRK2-202ENST00000412104 MEA1Q16626 185 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 CEP55Q53EZ4 464 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 NELFCDQ8IXH7 590 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 LRRN4CLQ8ND94 238 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 FBXO41Q8TF61 875 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 REEP2Q9BRK0 252 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 ZHX3Q9H4I2 956 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 RGL1Q9NZL6 768 aa27.21■■□□□ 1.95
VRK2-202ENST00000412104 CTNND1O60716 968 aaKnown RBP27.2■■□□□ 1.95
VRK2-202ENST00000412104 KIF20AO95235 890 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 ZBED6P86452 979 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 PPP2R5CQ13362 524 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 TBC1D10BQ4KMP7 808 aaPredicted RBP27.2■■□□□ 1.95
VRK2-202ENST00000412104 SLC30A10Q6XR72 485 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 CCDC125Q86Z20 511 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 PRPF38AQ8NAV1 312 aaKnown RBP27.2■■□□□ 1.95
VRK2-202ENST00000412104 EMILIN3Q9NT22 766 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 GINM1Q9NU53 330 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 HACL1Q9UJ83 578 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 GJA3Q9Y6H8 435 aa27.2■■□□□ 1.95
VRK2-202ENST00000412104 A0A1W2PQJ5 194 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 TRAF5O00463 557 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 NDUFA10O95299 355 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 HSD17B4P51659 736 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 PDCL2Q8N4E4 241 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 IQCDQ96DY2 449 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 BHMT2Q9H2M3 363 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 KCTD10Q9H3F6 313 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 CNOT7Q9UIV1 285 aaKnown RBP27.2■■□□□ 1.94
VRK2-202ENST00000412104 SIK3Q9Y2K2 1263 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 RABGAP1Q9Y3P9 1069 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 COL4A3BPQ9Y5P4 624 aa27.2■■□□□ 1.94
VRK2-202ENST00000412104 KIF5CO60282 957 aa27.19■■□□□ 1.94
VRK2-202ENST00000412104 EYA4O95677 639 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms