RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SEPT7Q16181 437 aaKnown RBP5.78□□□□□ -1.48
BRCA1-204ENST00000412061 TMEM177Q53S58 311 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 GALNT18Q6P9A2 607 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 C16orf59Q7L2K0 433 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 STRA8Q7Z7C7 330 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 NLRP10Q86W26 655 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 Q8N1Y9 231 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.78□□□□□ -1.48
BRCA1-204ENST00000412061 CABP5Q9NP86 173 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 PAK6Q9NQU5 681 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-204ENST00000412061 PRDM7Q9NQW5 492 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
BRCA1-204ENST00000412061 FITM1A5D6W6 292 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 IFRD1O00458 451 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-204ENST00000412061 NRDCO43847 1150 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 EYA4O95677 639 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 PYGMP11217 842 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 FPR2P25090 351 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 ITKQ08881 620 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 MTMR1Q13613 665 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 SART3Q15020 963 aaKnown RBP5.77□□□□□ -1.49
BRCA1-204ENST00000412061 CRY1Q16526 586 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 LZTR1Q8N653 840 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 PI4K2BQ8TCG2 481 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 USP33Q8TEY7 942 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 USP7Q93009 1102 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 MTMR8Q96EF0 704 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 ASIC4Q96FT7 647 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 KCNJ15Q99712 375 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 AASDHPPTQ9NRN7 309 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 CATSPERZQ9NTU4 200 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 SLC5A4Q9NY91 659 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 IMPACTQ9P2X3 320 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 NOB1Q9ULX3 412 aaKnown RBP5.77□□□□□ -1.49
BRCA1-204ENST00000412061 COA3Q9Y2R0 106 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-204ENST00000412061 RWDD3Q9Y3V2 267 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 X6R8D5 127 aa5.77□□□□□ -1.49
BRCA1-204ENST00000412061 PHLDB1Q86UU1 1377 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 C22orf46C9J442 243 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 BRINP1O60477 761 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 GAS7O60861 476 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 PPP1R11O60927 126 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-204ENST00000412061 FUCA1P04066 466 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 GNAT1P11488 350 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 SPIRE1Q08AE8 756 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 PLCL1Q15111 1095 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 C10orf62Q5T681 223 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-204ENST00000412061 MROH9Q5TGP6 573 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 OVCH1Q7RTY7 1134 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 CHST14Q8NCH0 376 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 AGBL5Q8NDL9 886 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 NUP43Q8NFH3 380 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 WDR66Q8TBY9 1149 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 PLEKHO2Q8TD55 490 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 TTC1Q99614 292 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 MTA3Q9BTC8 594 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 JAM3Q9BX67 310 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 ZNF700Q9H0M5 742 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 CCDC8Q9H0W5 538 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-204ENST00000412061 EPB41L1Q9H4G0 881 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 PDLIM7Q9NR12 457 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 B4GALT6Q9UBX8 382 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 ACSL6Q9UKU0 697 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 ZKSCAN5Q9Y2L8 839 aa5.76□□□□□ -1.49
BRCA1-204ENST00000412061 DGKIO75912 1065 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 WNT11O96014 354 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 F2P00734 622 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 FOSP01100 380 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-204ENST00000412061 GDNFP39905 211 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 MECP2P51608 486 aaKnown RBP5.75□□□□□ -1.49
BRCA1-204ENST00000412061 PIN1Q13526 163 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-204ENST00000412061 MLC1Q15049 377 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 NR0B2Q15466 257 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 ARHGAP44Q17R89 818 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 RNF219Q5W0B1 726 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-204ENST00000412061 NFXL1Q6ZNB6 911 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 LHFPL2Q6ZUX7 228 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 PASD1Q8IV76 773 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 TP53INP2Q8IXH6 220 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 NME8Q8N427 588 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 CISD2Q8N5K1 135 aaKnown RBP5.75□□□□□ -1.49
BRCA1-204ENST00000412061 C2orf69Q8N8R5 385 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 HOOK2Q96ED9 719 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 SCYL1Q96KG9 808 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 CDH19Q9H159 772 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 IFT22Q9H7X7 185 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 PCMTD2Q9NV79 361 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 CBLCQ9ULV8 474 aa5.75□□□□□ -1.49
BRCA1-204ENST00000412061 LAS1LQ9Y4W2 734 aaKnown RBP5.75□□□□□ -1.49
BRCA1-204ENST00000412061 A0A1W2PQJ5 194 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GOLGA6CA6NDK9 693 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GOLGA6BA6NDN3 693 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 ZNF891A8MT65 544 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 TRAF5O00463 557 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 ZEB2O60315 1214 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 HPXP02790 462 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GOLGA6DP0CG33 693 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 RAC2P15153 192 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms