RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 KPNA6O60684 536 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 CABYRO75952 493 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 MMP3P08254 477 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 GCFC2P16383 781 aaKnown RBP17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 PDCP20941 246 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 HSDL1Q3SXM5 330 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 LARP1BQ659C4 914 aaKnown RBP17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 CYFIP1Q7L576 1253 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 SPATA33Q96N06 139 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 SENP6Q9GZR1 1112 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
TRAPPC12-203ENST00000411973 ELP1O95163 1332 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 PDE4DIPQ5VU43 2346 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 H3BQV1 296 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 IPO5O00410 1097 aaKnown RBP17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 TDP2O95551 362 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 PURAQ00577 322 aaKnown RBP17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 DGKDQ16760 1214 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 LETM2Q2VYF4 491 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 C1orf53Q5VUE5 145 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 NOSTRINQ8IVI9 506 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 FERMT2Q96AC1 680 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 GLT1D1Q96MS3 346 aa17.52■□□□□ 0.4
TRAPPC12-203ENST00000411973 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.39
TRAPPC12-203ENST00000411973 KIF28PB7ZC32 967 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 SNX17Q15036 470 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 CXCL17Q6UXB2 119 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 GPR20Q99678 358 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 ZNF577Q9BSK1 485 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 TBC1D22BQ9NU19 505 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 PKD2L1Q9P0L9 805 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
TRAPPC12-203ENST00000411973 NOP56O00567 594 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 MSH4O15457 936 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 SORBS3O60504 671 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 MYL3P08590 195 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 SLC39A5Q6ZMH5 540 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 SLC5A5Q92911 643 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 RIT2Q99578 217 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 MTG1Q9BT17 334 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 HTATIP2Q9BUP3 242 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 STARD7Q9NQZ5 370 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 DDX25Q9UHL0 483 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-203ENST00000411973 SLC37A4O43826 429 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 CCNT1O60563 726 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 ETNPPLQ8TBG4 499 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 TELO2Q9Y4R8 837 aa17.49■□□□□ 0.39
TRAPPC12-203ENST00000411973 GSTTP1A0A1W2PQM5 241 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 TBX3O15119 743 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 F2P00734 622 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 SYT1P21579 422 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 SLC43A3Q8NBI5 491 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 KAT2BQ92831 832 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 C16orf70Q9BSU1 422 aa17.48■□□□□ 0.39
TRAPPC12-203ENST00000411973 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 PSMD10O75832 226 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 ATG7O95352 703 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 CDK7P50613 346 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 ACTR2P61160 394 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 SP4Q02446 784 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 MLLT1Q03111 559 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 ZNF746Q6NUN9 644 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 CEP290O15078 2479 aa17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-203ENST00000411973 ARVCFO00192 962 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 HAS3O00219 553 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 WNT7AO00755 349 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 CCNE2O96020 404 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 LGALS2P05162 132 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 PDIA4P13667 645 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 TCF7P36402 384 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 KRT76Q01546 638 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 ITGA7Q13683 1181 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 BECN1Q14457 450 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 B3GNT9Q6UX72 402 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 TOX2Q96NM4 488 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 KATNAL1Q9BW62 490 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 NOL7Q9UMY1 257 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 WDR81Q562E7 1941 aa17.46■□□□□ 0.39
TRAPPC12-203ENST00000411973 IGKV6D-21A0A0A0MT36 114 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms