RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ERMNQ8TAM6 284 aa21.04■□□□□ 0.96
CDC42-204ENST00000411827 TRIB2Q92519 343 aa21.04■□□□□ 0.96
CDC42-204ENST00000411827 FLRT1Q9NZU1 646 aa21.04■□□□□ 0.96
CDC42-204ENST00000411827 DDX41Q9UJV9 622 aaKnown RBP21.04■□□□□ 0.96
CDC42-204ENST00000411827 FBXO2Q9UK22 296 aaPredicted RBP21.04■□□□□ 0.96
CDC42-204ENST00000411827 FAM184BQ9ULE4 1060 aa21.04■□□□□ 0.96
CDC42-204ENST00000411827 DDX11L8A8MPP1 907 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 KCNA2P16389 499 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 GRK4P32298 578 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 CYP2C19P33261 490 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 LAMC2Q13753 1193 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 DUSP28Q4G0W2 176 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 METTL7BQ6UX53 244 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 EEPD1Q7L9B9 569 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 FBXO16Q8IX29 292 aaPredicted RBP21.03■□□□□ 0.96
CDC42-204ENST00000411827 SMAP1Q8IYB5 467 aaPredicted RBP21.03■□□□□ 0.96
CDC42-204ENST00000411827 IGSF22Q8N9C0 903 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 EMID1Q96A84 441 aaPredicted RBP21.03■□□□□ 0.96
CDC42-204ENST00000411827 PYM1Q9BRP8 204 aaKnown RBP21.03■□□□□ 0.96
CDC42-204ENST00000411827 PTPN22Q9Y2R2 807 aa21.03■□□□□ 0.96
CDC42-204ENST00000411827 ZNF865P0CJ78 1059 aaPredicted RBP21.02■□□□□ 0.96
CDC42-204ENST00000411827 AKR1A1P14550 325 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 MARCKSP29966 332 aaPredicted RBP21.02■□□□□ 0.96
CDC42-204ENST00000411827 TXLNAP40222 546 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 JAK3P52333 1124 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 SEMA3FQ13275 785 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 NEK9Q8TD19 979 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 JPH1Q9HDC5 661 aaPredicted RBP21.02■□□□□ 0.96
CDC42-204ENST00000411827 LRWD1Q9UFC0 647 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
CDC42-204ENST00000411827 PCDHA7Q9UN72 937 aa21.02■□□□□ 0.96
CDC42-204ENST00000411827 VWA3AA6NCI4 1184 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 DHX15O43143 795 aaKnown RBP21.01■□□□□ 0.95
CDC42-204ENST00000411827 MSCO60682 206 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 GH1P01241 217 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 CYBAP13498 195 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 MUTP22033 750 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 CMA1P23946 247 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 UBE2HP62256 183 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 CAP1Q01518 475 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 TNFAIP2Q03169 654 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 CCDC144BQ3MJ40 725 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 CELF3Q5SZQ8 465 aaKnown RBP21.01■□□□□ 0.95
CDC42-204ENST00000411827 MAP3K21Q5TCX8 1036 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 HAUS3Q68CZ6 603 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 DHX37Q8IY37 1157 aaKnown RBP21.01■□□□□ 0.95
CDC42-204ENST00000411827 SLC9A2Q9UBY0 812 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 LRRC37A2A6NM11 1700 aa21.01■□□□□ 0.95
CDC42-204ENST00000411827 KIAA1217Q5T5P2 1943 aa21■□□□□ 0.95
CDC42-204ENST00000411827 WDR64B1ANS9 1081 aa21■□□□□ 0.95
CDC42-204ENST00000411827 SEPT4O43236 478 aa21■□□□□ 0.95
CDC42-204ENST00000411827 DKC1O60832 514 aaKnown RBP eCLIP21■□□□□ 0.95
CDC42-204ENST00000411827 UBA1P22314 1058 aaKnown RBP21■□□□□ 0.95
CDC42-204ENST00000411827 UBA7P41226 1012 aa21■□□□□ 0.95
CDC42-204ENST00000411827 TECP42680 631 aa21■□□□□ 0.95
CDC42-204ENST00000411827 ITGB3BPQ13352 177 aaPredicted RBP21■□□□□ 0.95
CDC42-204ENST00000411827 BRDTQ58F21 947 aaPredicted RBP21■□□□□ 0.95
CDC42-204ENST00000411827 AXDND1Q5T1B0 1012 aaPredicted RBP21■□□□□ 0.95
CDC42-204ENST00000411827 KRT79Q5XKE5 535 aa21■□□□□ 0.95
CDC42-204ENST00000411827 B3GNT9Q6UX72 402 aa21■□□□□ 0.95
CDC42-204ENST00000411827 ZFP91Q96JP5 570 aaPredicted RBP21■□□□□ 0.95
CDC42-204ENST00000411827 MLXIPQ9HAP2 919 aa21■□□□□ 0.95
CDC42-204ENST00000411827 FAM13BQ9NYF5 915 aa21■□□□□ 0.95
CDC42-204ENST00000411827 VAV3Q9UKW4 847 aa21■□□□□ 0.95
CDC42-204ENST00000411827 ATP9AO75110 1047 aa20.99■□□□□ 0.95
CDC42-204ENST00000411827 MCM4P33991 863 aa20.99■□□□□ 0.95
CDC42-204ENST00000411827 SPIRE1Q08AE8 756 aa20.99■□□□□ 0.95
CDC42-204ENST00000411827 EPHA7Q15375 998 aa20.99■□□□□ 0.95
CDC42-204ENST00000411827 CCSER1Q9C0I3 900 aa20.99■□□□□ 0.95
CDC42-204ENST00000411827 GDPD2Q9HCC8 539 aa20.99■□□□□ 0.95
CDC42-204ENST00000411827 DUSP11O75319 330 aaKnown RBP20.98■□□□□ 0.95
CDC42-204ENST00000411827 GGPS1O95749 300 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 PRKAR2AP13861 404 aaKnown RBP20.98■□□□□ 0.95
CDC42-204ENST00000411827 ELNP15502 786 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 ADCYAP1R1P41586 468 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 CACNB2Q08289 660 aaPredicted RBP20.98■□□□□ 0.95
CDC42-204ENST00000411827 FBXO46Q6PJ61 603 aaPredicted RBP20.98■□□□□ 0.95
CDC42-204ENST00000411827 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 SPC25Q9HBM1 224 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 PDGFCQ9NRA1 345 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 CCDC39Q9UFE4 941 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 PCDHA10Q9Y5I2 948 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 PTCH2Q9Y6C5 1203 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 KDM3AQ9Y4C1 1321 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 TCHHQ07283 1943 aa20.98■□□□□ 0.95
CDC42-204ENST00000411827 ZSWIM8A7E2V4 1837 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 NOP56O00567 594 aaKnown RBP20.97■□□□□ 0.95
CDC42-204ENST00000411827 PRPF40AO75400 957 aaKnown RBP20.97■□□□□ 0.95
CDC42-204ENST00000411827 FARP2O94887 1054 aaPredicted RBP20.97■□□□□ 0.95
CDC42-204ENST00000411827 PSAPP07602 524 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 CAPN2P17655 700 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 SP2Q02086 613 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 IL17AQ16552 155 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 LY6KQ17RY6 165 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 RESP18Q5W5W9 173 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 MIS18BP1Q6P0N0 1132 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 MIER3Q7Z3K6 550 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 PPTC7Q8NI37 304 aa20.97■□□□□ 0.95
CDC42-204ENST00000411827 SEPT1Q8WYJ6 367 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms