RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 RBM15Q96T37 977 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 TRIM55Q9BYV6 548 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 SLC6A20Q9NP91 592 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 ASH2LQ9UBL3 628 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 CROTQ9UKG9 612 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 ASXL2Q76L83 1435 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 TRAV20A0A0B4J274 112 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 CCDC85CA6NKD9 419 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 E9PSI1 815 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 KRIT1O00522 736 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 NKRFO15226 690 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 B4GALT3O60512 393 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 MAFKO60675 156 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 STK10O94804 968 aaKnown RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 CYP1A1P04798 512 aaPredicted RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 GRK2P25098 689 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 GRK3P35626 688 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 IFRD2Q12894 506 aaPredicted RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 TUSC3Q13454 348 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 BORAQ6PGQ7 559 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 RSPO2Q6UXX9 243 aaPredicted RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 OTOP3Q7RTS5 596 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 FAM124AQ86V42 546 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 PROSER1Q86XN7 944 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 LGI4Q8N135 537 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 ST13P5Q8NFI4 369 aaPredicted RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZCCHC14Q8WYQ9 949 aaKnown RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 LCORQ96JN0 433 aaPredicted RBP3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 TMEM209Q96SK2 561 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 L2HGDHQ9H9P8 463 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 TELO2Q9Y4R8 837 aa3.22□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZNF536O15090 1300 aa3.21□□□□□ -1.89
RNU2-54P-201ENST00000410299 ADCY3O60266 1144 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 PLATP00750 562 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 SOD2P04179 222 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 GNAT1P11488 350 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 INSRRP14616 1297 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 MAGEA10P43363 369 aaPredicted RBP3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 GPR85P60893 370 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 ZNF827Q17R98 1081 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 KIZQ2M2Z5 673 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 NAALADL2Q58DX5 795 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 STYK1Q6J9G0 422 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 LIMS2Q7Z4I7 341 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 TRIM48Q8IWZ4 208 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 CKAP2LQ8IYA6 745 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 IFNL3Q8IZI9 196 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 LRRC47Q8N1G4 583 aaKnown RBP3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 UHMK1Q8TAS1 419 aaKnown RBP3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 MBD6Q96DN6 1003 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 YTHDC1Q96MU7 727 aaKnown RBP3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 SPATA9Q9BWV2 254 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 TMEM168Q9H0V1 697 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 TMPRSS5Q9H3S3 457 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 IPPKQ9H8X2 491 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 SMPD4Q9NXE4 827 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 PPP1R1BQ9UD71 204 aaPredicted RBP3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 PFDN2Q9UHV9 154 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 CNOT11Q9UKZ1 510 aaKnown RBP3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 TRAF6Q9Y4K3 522 aa3.21□□□□□ -1.9
RNU2-54P-201ENST00000410299 C9orf118A6NHY6 69 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 PDPK1O15530 556 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 CKMP06732 381 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 COL6A1P12109 1028 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 FAHP16930 419 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 GLRBP48167 497 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 ZC3H6P61129 1189 aaKnown RBP3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 SPIRE1Q08AE8 756 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 PUM1Q14671 1186 aaKnown RBP eCLIP3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 ZXDCQ2QGD7 858 aaPredicted RBP3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 PAN2Q504Q3 1202 aaKnown RBP3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 FOXB2Q5VYV0 432 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 VASNQ6EMK4 673 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 CYP4F22Q6NT55 531 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 TRMT10BQ6PF06 316 aaKnown RBP3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 DTX3Q8N9I9 347 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 TTLL11Q8NHH1 800 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 IGDCC4Q8TDY8 1250 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 LOXL4Q96JB6 756 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 C8orf49Q96NF6 230 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 GPR20Q99678 358 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 ZFYVE21Q9BQ24 234 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 CD244Q9BZW8 370 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 HSPBP1Q9NZL4 362 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 DSEQ9UL01 958 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 MSRB2Q9Y3D2 182 aa3.2□□□□□ -1.9
RNU2-54P-201ENST00000410299 TCRBV5S4A2TA0A5A2 114 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 FAM47E-STBD1D6RA91 191 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 ACOT7O00154 380 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 U2SURPO15042 1029 aaKnown RBP3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 LAMTOR5O43504 91 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 DIAPH1O60610 1272 aaKnown RBP3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 CYP7B1O75881 506 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 ADAM17P78536 824 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 SSRP1Q08945 709 aaKnown RBP3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 RASGRF1Q13972 1273 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 SKIDA1Q1XH10 827 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 MTERF2Q49AM1 385 aa3.19□□□□□ -1.9
RNU2-54P-201ENST00000410299 HABP4Q5JVS0 413 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms