RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 MEIS1O00470 390 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 NOP56O00567 594 aaKnown RBP23.67■■□□□ 1.38
VSX1-204ENST00000409958 F2P00734 622 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 XBP1P17861 261 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 ZNF76P36508 570 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 NIPA1Q7RTP0 329 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 DAGLBQ8NCG7 672 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 IL27Q8NEV9 243 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 CYP2W1Q8TAV3 490 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 KCNH7Q9NS40 1196 aa23.67■■□□□ 1.38
VSX1-204ENST00000409958 LTBP2Q14767 1821 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 B4GALT4O60513 344 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 ZNF286BP0CG31 522 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 RAG1P15918 1043 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 BLIDQ8IZY5 108 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 NSUN7Q8NE18 718 aaKnown RBP23.66■■□□□ 1.38
VSX1-204ENST00000409958 ZSCAN31Q96LW9 406 aaPredicted RBP23.66■■□□□ 1.38
VSX1-204ENST00000409958 GPR20Q99678 358 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 TRPV6Q9H1D0 765 aa23.66■■□□□ 1.38
VSX1-204ENST00000409958 A0A1W2PPC1 479 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 SUPT20HL2P0C7V6 817 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 FDPSP14324 419 aaKnown RBP23.65■■□□□ 1.38
VSX1-204ENST00000409958 ITGB8P26012 769 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 PSEN2P49810 448 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 NPY5RQ15761 445 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 FAM47CQ5HY64 1035 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 SESTD1Q86VW0 696 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 BADQ92934 168 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 PHF20Q9BVI0 1012 aa23.65■■□□□ 1.38
VSX1-204ENST00000409958 FAM86B1E9PN63 330 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 M0R2N6 131 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 HAS3O00219 553 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 DTNBO60941 627 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 TIMP1P01033 207 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 FAM86B2P0C5J1 330 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 ARP10275 920 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 CHMP4BP1P59074 171 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 ST3GAL1Q11201 340 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 MFSD10Q14728 455 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 TBC1D32Q96NH3 1257 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 C16orf70Q9BSU1 422 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 UBE2OQ9C0C9 1292 aaKnown RBP23.64■■□□□ 1.38
VSX1-204ENST00000409958 DOCK5Q9H7D0 1870 aa23.64■■□□□ 1.38
VSX1-204ENST00000409958 LGALS2P05162 132 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 CIITAP33076 1130 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 KIAA0753Q2KHM9 967 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 ALG1Q9BT22 464 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 AGO4Q9HCK5 861 aaKnown RBP23.63■■□□□ 1.37
VSX1-204ENST00000409958 SH2B1Q9NRF2 756 aaPredicted RBP23.63■■□□□ 1.37
VSX1-204ENST00000409958 TRMT13Q9NUP7 481 aaKnown RBP23.63■■□□□ 1.37
VSX1-204ENST00000409958 PKD2L1Q9P0L9 805 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 KCNJ14Q9UNX9 436 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 NFASCO94856 1347 aa23.63■■□□□ 1.37
VSX1-204ENST00000409958 IGLV3-22A0A075B6J6 115 aa23.62■■□□□ 1.37
VSX1-204ENST00000409958 SP4Q02446 784 aa23.62■■□□□ 1.37
VSX1-204ENST00000409958 PLA2G4DQ86XP0 818 aa23.62■■□□□ 1.37
VSX1-204ENST00000409958 PPP1R13LQ8WUF5 828 aa23.62■■□□□ 1.37
VSX1-204ENST00000409958 SDF4Q9BRK5 362 aa23.62■■□□□ 1.37
VSX1-204ENST00000409958 JPH1Q9HDC5 661 aaPredicted RBP23.62■■□□□ 1.37
VSX1-204ENST00000409958 TELO2Q9Y4R8 837 aa23.62■■□□□ 1.37
VSX1-204ENST00000409958 ST18O60284 1047 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 JAK2O60674 1132 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 USP11P51784 963 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 SETQ01105 290 aaPredicted RBP23.61■■□□□ 1.37
VSX1-204ENST00000409958 CCDC83Q8IWF9 413 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 C7orf31Q8N865 590 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 SEPT1Q8WYJ6 367 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 BACH2Q9BYV9 841 aa23.61■■□□□ 1.37
VSX1-204ENST00000409958 H3BRB1 525 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 ITGB3BPQ13352 177 aaPredicted RBP23.6■■□□□ 1.37
VSX1-204ENST00000409958 MFSD5Q6N075 450 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 TBCKQ8TEA7 893 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 LLPHQ9BRT6 129 aaKnown RBP23.6■■□□□ 1.37
VSX1-204ENST00000409958 NOC4LQ9BVI4 516 aaKnown RBP23.6■■□□□ 1.37
VSX1-204ENST00000409958 HIPK3Q9H422 1215 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 TUT1Q9H6E5 874 aaKnown RBP23.6■■□□□ 1.37
VSX1-204ENST00000409958 GJB4Q9NTQ9 266 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 HDAC6Q9UBN7 1215 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 SLC9A2Q9UBY0 812 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 GTF2IRD1Q9UHL9 959 aa23.6■■□□□ 1.37
VSX1-204ENST00000409958 GSTTP1A0A1W2PQM5 241 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 EDIL3O43854 480 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 TCF7P36402 384 aaPredicted RBP23.59■■□□□ 1.37
VSX1-204ENST00000409958 GDF6Q6KF10 455 aaPredicted RBP23.59■■□□□ 1.37
VSX1-204ENST00000409958 KRT25Q7Z3Z0 450 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 TDHQ8IZJ6 230 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 PPP1R12CQ9BZL4 782 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 ZNF215Q9UL58 517 aaPredicted RBP23.59■■□□□ 1.37
VSX1-204ENST00000409958 CYP2C9P11712 490 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 FXR1P51114 621 aaKnown RBP eCLIP23.59■■□□□ 1.37
VSX1-204ENST00000409958 FPGSQ05932 587 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 NONOQ15233 471 aaKnown RBP eCLIP23.59■■□□□ 1.37
VSX1-204ENST00000409958 PTGISQ16647 500 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 PRR16Q569H4 304 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 UTP14CQ5TAP6 766 aaKnown RBP23.59■■□□□ 1.37
VSX1-204ENST00000409958 NOD1Q9Y239 953 aa23.59■■□□□ 1.37
VSX1-204ENST00000409958 IPO5O00410 1097 aaKnown RBP23.58■■□□□ 1.36
VSX1-204ENST00000409958 CYP2C18P33260 490 aa23.58■■□□□ 1.36
VSX1-204ENST00000409958 TRIM50Q86XT4 487 aa23.58■■□□□ 1.36
VSX1-204ENST00000409958 TMEM199Q8N511 208 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms