RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 TBC1D22AQ8WUA7 517 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 N4BP2L2Q92802 583 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-205ENST00000409455 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-205ENST00000409455 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 FAM205AQ6ZU69 1335 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 SNCBQ16143 134 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 SLC4A8Q2Y0W8 1093 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 ANKRD40Q6AI12 368 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 PIK3R5Q8WYR1 880 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 MS4A14Q96JA4 679 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 VEZTQ9HBM0 779 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 MCM9Q9NXL9 1143 aa17.02■□□□□ 0.31
LIMS2-205ENST00000409455 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 USP17L8P0C7I0 530 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 HPDP32754 393 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-205ENST00000409455 PPP1R2P41236 205 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 WLSQ5T9L3 541 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 PPANQ9NQ55 473 aaKnown RBP17.01■□□□□ 0.31
LIMS2-205ENST00000409455 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-205ENST00000409455 BAZ2AQ9UIF9 1905 aaKnown RBP17.01■□□□□ 0.31
LIMS2-205ENST00000409455 DUOX1Q9NRD9 1551 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 ZSCAN5CA6NGD5 496 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-205ENST00000409455 PJA2O43164 708 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 FGRP09769 529 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 C6orf89Q6UWU4 347 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 RNF10Q8N5U6 811 aaKnown RBP17.01■□□□□ 0.31
LIMS2-205ENST00000409455 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 C3orf20Q8ND61 904 aa17.01■□□□□ 0.31
LIMS2-205ENST00000409455 CALML3P27482 149 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 BTDP43251 543 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 KLHDC7AQ5VTJ3 777 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 TGFBRAP1Q8WUH2 860 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 CNKSR1Q969H4 720 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 ARPP21Q9UBL0 812 aaPredicted RBP17■□□□□ 0.31
LIMS2-205ENST00000409455 PLAAQ9Y263 795 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 GPR75-ASB3A0A0A6YYF3 556 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 G3V3G9 751 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 PDE4DQ08499 809 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 SBK1Q52WX2 424 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 CCDC178Q5BJE1 867 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 CEP57Q86XR8 500 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 PARP9Q8IXQ6 854 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 SRBD1Q8N5C6 995 aaKnown RBP17■□□□□ 0.31
LIMS2-205ENST00000409455 PLIN2Q99541 437 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 MXD3Q9BW11 206 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 SALL4Q9UJQ4 1053 aa17■□□□□ 0.31
LIMS2-205ENST00000409455 PP2D1A8MPX8 630 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-205ENST00000409455 BUB1O43683 1085 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 MYZAPP0CAP1 466 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 RASSF7Q02833 373 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 CYB5D1Q6P9G0 228 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 RRAGAQ7L523 313 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 CCDC84Q86UT8 332 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-205ENST00000409455 CERS5Q8N5B7 392 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 MTMR8Q96EF0 704 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-205ENST00000409455 MAGEF1Q9HAY2 307 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 GRID2IPA4D2P6 1211 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 LRRC53A6NM62 1247 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 F8W031 263 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-205ENST00000409455 PFKFB3Q16875 520 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-205ENST00000409455 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 CASKIN2Q8WXE0 1202 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 KRT12Q99456 494 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 EYA3Q99504 573 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 CUEDC2Q9H467 287 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 MMRN2Q9H8L6 949 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 KCNQ5Q9NR82 932 aa16.99■□□□□ 0.31
LIMS2-205ENST00000409455 MAST2Q6P0Q8 1798 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 GMNCA6NCL1 334 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 PCP11498 1178 aaKnown RBP16.98■□□□□ 0.31
LIMS2-205ENST00000409455 EZRP15311 586 aaKnown RBP16.98■□□□□ 0.31
LIMS2-205ENST00000409455 HSPA9P38646 679 aaKnown RBP16.98■□□□□ 0.31
LIMS2-205ENST00000409455 VWA3BQ502W6 1294 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 CCSER1Q9C0I3 900 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 TMBIM4Q9HC24 238 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 SIK3Q9Y2K2 1263 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
LIMS2-205ENST00000409455 EPHB6O15197 1021 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 ATP2B2Q01814 1243 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
LIMS2-205ENST00000409455 C12orf60Q5U649 245 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 LRIG3Q6UXM1 1119 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 BLIDQ8IZY5 108 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.318e-7■■■■■ 58.5
LIMS2-205ENST00000409455 MIEF2Q96C03 454 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 SGSM3Q96HU1 749 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 NDST4Q9H3R1 872 aa16.98■□□□□ 0.31
LIMS2-205ENST00000409455 SLX4Q8IY92 1834 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 GCFC2P16383 781 aaKnown RBP16.97■□□□□ 0.31
LIMS2-205ENST00000409455 SCP2P22307 547 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 DNA2P51530 1060 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 ASIC1P78348 528 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms