RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SCN10AQ9Y5Y9 1956 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 PRR33A8MZF0 331 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 ZNF213O14771 459 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 PPFIA4O75335 1185 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 LGR5O75473 907 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 FGAP02671 866 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 CXCL10P02778 98 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 FGRP09769 529 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 HSPD1P10809 573 aaKnown RBP9.02□□□□□ -0.97
LSM5-202ENST00000409292 GNAT1P11488 350 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 CKBP12277 381 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 KCNA5P22460 613 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 COPS2P61201 443 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 RBL2Q08999 1139 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 CDC37Q16543 378 aaPredicted RBP9.02□□□□□ -0.97
LSM5-202ENST00000409292 LY6KQ17RY6 165 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 KIAA0753Q2KHM9 967 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 LEXMQ3ZCV2 418 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 ASPRV1Q53RT3 343 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 KRT40Q6A162 431 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 PTCRAQ6ISU1 281 aaPredicted RBP9.02□□□□□ -0.97
LSM5-202ENST00000409292 GDF6Q6KF10 455 aaPredicted RBP9.02□□□□□ -0.97
LSM5-202ENST00000409292 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 EP400NLQ6ZTU2 488 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 PPTC7Q8NI37 304 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 SEPT8Q92599 483 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 YME1L1Q96TA2 773 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
LSM5-202ENST00000409292 VCANP13611 3396 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 ZMYM6O95789 1325 aa9.02□□□□□ -0.97
LSM5-202ENST00000409292 LINC01553A4QN01 128 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 EPOPA6NHQ4 379 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 RSPH10B2B2RC85 870 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
LSM5-202ENST00000409292 RSPH10BP0C881 870 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 ARHGAP1Q07960 439 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 ANKRD45Q5TZF3 282 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 CCDC62Q6P9F0 684 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 MYOCDQ8IZQ8 938 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 SAMD3Q8N6K7 520 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
LSM5-202ENST00000409292 PPP2R3CQ969Q6 453 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
LSM5-202ENST00000409292 VWCEQ96DN2 955 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 MRPL38Q96DV4 380 aaKnown RBP9.01□□□□□ -0.97
LSM5-202ENST00000409292 POP1Q99575 1024 aaKnown RBP9.01□□□□□ -0.97
LSM5-202ENST00000409292 UBAC1Q9BSL1 405 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 AMNQ9BXJ7 453 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 KCNH6Q9H252 994 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 SUGCTQ9HAC7 445 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 INCENPQ9NQS7 918 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.01□□□□□ -0.97
LSM5-202ENST00000409292 HDAC6Q9UBN7 1215 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 CDH23Q9H251 3354 aa9.01□□□□□ -0.97
LSM5-202ENST00000409292 LAMA2P24043 3122 aaKnown RBP9□□□□□ -0.97
LSM5-202ENST00000409292 SCN5AQ14524 2016 aa9□□□□□ -0.97
LSM5-202ENST00000409292 TANC1Q9C0D5 1861 aa9□□□□□ -0.97
LSM5-202ENST00000409292 BDP1A6H8Y1 2624 aa9□□□□□ -0.97
LSM5-202ENST00000409292 C17orf102A2RUQ5 167 aa9□□□□□ -0.97
LSM5-202ENST00000409292 LCHNA4D1U4 455 aa9□□□□□ -0.97
LSM5-202ENST00000409292 NOP56O00567 594 aaKnown RBP9□□□□□ -0.97
LSM5-202ENST00000409292 CAND2O75155 1236 aa9□□□□□ -0.97
LSM5-202ENST00000409292 ARIH2O95376 493 aa9□□□□□ -0.97
LSM5-202ENST00000409292 CFBP00751 764 aa9□□□□□ -0.97
LSM5-202ENST00000409292 NR3C2P08235 984 aa9□□□□□ -0.97
LSM5-202ENST00000409292 GOLGA8HP0CJ92 632 aa9□□□□□ -0.97
LSM5-202ENST00000409292 SNHG28P0DPA3 235 aa9□□□□□ -0.97
LSM5-202ENST00000409292 TGFB3P10600 412 aa9□□□□□ -0.97
LSM5-202ENST00000409292 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
LSM5-202ENST00000409292 EIF2AK2P19525 551 aaKnown RBP9□□□□□ -0.97
LSM5-202ENST00000409292 THPOP40225 353 aa9□□□□□ -0.97
LSM5-202ENST00000409292 HAND2P61296 217 aa9□□□□□ -0.97
LSM5-202ENST00000409292 DEFB103AP81534 67 aa9□□□□□ -0.97
LSM5-202ENST00000409292 GNPTABQ3T906 1256 aa9□□□□□ -0.97
LSM5-202ENST00000409292 VPS53Q5VIR6 699 aa9□□□□□ -0.97
LSM5-202ENST00000409292 RASGRP2Q7LDG7 609 aa9□□□□□ -0.97
LSM5-202ENST00000409292 FAM178BQ8IXR5 827 aa9□□□□□ -0.97
LSM5-202ENST00000409292 PPP1R13LQ8WUF5 828 aa9□□□□□ -0.97
LSM5-202ENST00000409292 SPATA33Q96N06 139 aa9□□□□□ -0.97
LSM5-202ENST00000409292 TAAR1Q96RJ0 339 aa9□□□□□ -0.97
LSM5-202ENST00000409292 UBA5Q9GZZ9 404 aa9□□□□□ -0.97
LSM5-202ENST00000409292 VAT1LQ9HCJ6 419 aa9□□□□□ -0.97
LSM5-202ENST00000409292 PRKAG3Q9UGI9 489 aa9□□□□□ -0.97
LSM5-202ENST00000409292 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
LSM5-202ENST00000409292 RWDD3Q9Y3V2 267 aa9□□□□□ -0.97
LSM5-202ENST00000409292 CCDC171Q6TFL3 1326 aa9□□□□□ -0.97
LSM5-202ENST00000409292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.99□□□□□ -0.97
LSM5-202ENST00000409292 FAM86C2PA6NEL3 165 aa8.99□□□□□ -0.97
LSM5-202ENST00000409292 HIP1O00291 1037 aa8.99□□□□□ -0.97
LSM5-202ENST00000409292 DCXO43602 365 aa8.99□□□□□ -0.97
LSM5-202ENST00000409292 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
LSM5-202ENST00000409292 LPXNO60711 386 aa8.99□□□□□ -0.97
LSM5-202ENST00000409292 NBNO60934 754 aa8.99□□□□□ -0.97
LSM5-202ENST00000409292 F2P00734 622 aa8.99□□□□□ -0.97
LSM5-202ENST00000409292 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms