RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 DEFB128Q7Z7B8 93 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 RAB11FIP4Q86YS3 637 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 FBXL16Q8N461 479 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 TTYH1Q9H313 450 aaPredicted RBP10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 RIC8AQ9NPQ8 531 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 BARHL2Q9NY43 387 aa10.4□□□□□ -0.74
SNORD88A-201ENST00000408314 NID2Q14112 1375 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 MYH7BA7E2Y1 1941 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 RPS6KB1P23443 525 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 SP2Q02086 613 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 ADCK5Q3MIX3 580 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 WWC2Q6AWC2 1192 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 CNKSR3Q6P9H4 555 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 Q6ZUG5 572 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 SERINC5Q86VE9 423 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 SKAP1Q86WV1 359 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 BICD2Q8TD16 824 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 BRF1Q92994 677 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 ATP6V0A1Q93050 837 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 TCEANC2Q96MN5 208 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 GPR20Q99678 358 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 SDF4Q9BRK5 362 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 C16orf70Q9BSU1 422 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 C6orf50Q9HD87 102 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 TCEAL9Q9UHQ7 104 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 PCDHA6Q9UN73 950 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 PCDHA8Q9Y5H6 950 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 SNX14Q9Y5W7 946 aa10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 V9GY48 417 aaPredicted RBP10.39□□□□□ -0.75
SNORD88A-201ENST00000408314 LAMA2P24043 3122 aaKnown RBP10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 ABHD14A-ACY1A0A1B0GW23 586 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SMCO2A6NFE2 343 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SORBS3O60504 671 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 CENPBP07199 599 aaPredicted RBP10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 CKBP12277 381 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SCG2P13521 617 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 GNA11P29992 359 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 UBE2SQ16763 222 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 PFKFB3Q16875 520 aaPredicted RBP10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 PPP2R2DQ66LE6 453 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 TAF2Q6P1X5 1199 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 CPLX2Q6PUV4 134 aaKnown RBP10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 RSPH3Q86UC2 560 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 TRIM22Q8IYM9 498 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 MYLIPQ8WY64 445 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SEPT1Q8WYJ6 367 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 ANO3Q9BYT9 981 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 SMARCAD1Q9H4L7 1026 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 AZI2Q9H6S1 392 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 JPH1Q9HDC5 661 aaPredicted RBP10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 JADE2Q9NQC1 790 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 ERAP1Q9NZ08 941 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 BRPF3Q9ULD4 1205 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 UBIAD1Q9Y5Z9 338 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 CYP46A1Q9Y6A2 500 aa10.38□□□□□ -0.75
SNORD88A-201ENST00000408314 NFASCO94856 1347 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 NRCAMQ92823 1304 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 hCG_1642624A0A1W2PR95 340 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 STXBP3O00186 592 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 CXCL10P02778 98 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 ITGB5P18084 799 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 HOXC8P31273 242 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 TCF7P36402 384 aaPredicted RBP10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 ZNF76P36508 570 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 THPOP40225 353 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 SETQ01105 290 aaPredicted RBP10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 SEMA3FQ13275 785 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 IKBKEQ14164 716 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 CEP55Q53EZ4 464 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 NIPA1Q7RTP0 329 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 FAM177A1Q8N128 213 aaPredicted RBP10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 REXO1Q8N1G1 1221 aaKnown RBP10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 GLG1Q92896 1179 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 RNF26Q9BY78 433 aaPredicted RBP10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 AGXT2Q9BYV1 514 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 TM6SF1Q9BZW5 370 aa10.37□□□□□ -0.75
SNORD88A-201ENST00000408314 GRXCR1A8MXD5 290 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 RSPH10B2B2RC85 870 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 CPLX1O14810 134 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 PRPF3O43395 683 aaKnown RBP10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 LGR5O75473 907 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 RSPH10BP0C881 870 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 KCNA2P16389 499 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 CDC27P30260 824 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 SREBF1P36956 1147 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 PBX2P40425 430 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 SLC26A2P50443 739 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms