RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FAM83BQ5T0W9 1011 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 TMC6Q7Z403 805 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 TRPV1Q8NER1 839 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 NPLOC4Q8TAT6 608 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 SPATA20Q8TB22 786 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 ERCC4Q92889 916 aaPredicted RBP14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 GMCL1Q96IK5 515 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 CTAGE1Q96RT6 745 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 NUP88Q99567 741 aaPredicted RBP14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 SPZ1Q9BXG8 430 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 TANGO6Q9C0B7 1094 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 RABGAP1Q9Y3P9 1069 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 PALM3A6NDB9 673 aaPredicted RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 PARP1P09874 1014 aaKnown RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 PDHBP11177 359 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 BMP3P12645 472 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 TNNT1P13805 278 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 PTGDRQ13258 359 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 SYCP1Q15431 976 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 PTPN14Q15678 1187 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 ZNF174Q15697 407 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 CCDC144BQ3MJ40 725 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 POTEEQ6S8J3 1075 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 CATSPERGQ6ZRH7 1159 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 KRT25Q7Z3Z0 450 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 DPP9Q86TI2 863 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 FCHSD1Q86WN1 690 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 DCAF4Q8WV16 495 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 CCDC47Q96A33 483 aaKnown RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 TRIM43Q96BQ3 446 aaPredicted RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 RRP36Q96EU6 259 aaKnown RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 MAGEF1Q9HAY2 307 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 C6orf50Q9HD87 102 aa14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 SEC63Q9UGP8 760 aaKnown RBP14.49□□□□□ -0.09
SMARCB1-203ENST00000407082 PRUNE2Q8WUY3 3088 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 PRPHP41219 470 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 CCDC96Q2M329 555 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 FILIP1LQ4L180 1135 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 PIK3AP1Q6ZUJ8 805 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 KCTD1Q719H9 257 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 RASGRP2Q7LDG7 609 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 DHX58Q96C10 678 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 PDCL3Q9H2J4 239 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 CUEDC2Q9H467 287 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 PDLIM7Q9NR12 457 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 BARHL2Q9NY43 387 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 MAD2L2Q9UI95 211 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 SPTBN5Q9NRC6 3674 aaKnown RBP14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 EYSQ5T1H1 3165 aa14.48□□□□□ -0.09
SMARCB1-203ENST00000407082 DNAH12Q6ZR08 3092 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 FRMPD2Q68DX3 1309 aaPredicted RBP14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 GOLGA6L9A6NEM1 432 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 TMEM232C9JQI7 657 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 GTPBP6O43824 516 aaPredicted RBP14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 CNMDO75829 334 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 FLOT1O75955 427 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 SNHG28P0DPA3 235 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 PLA2G5P39877 138 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 PPP1R2P41236 205 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 TLE2Q04725 743 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 LRMPQ12912 555 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 IKQ13123 557 aaPredicted RBP14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 COG2Q14746 738 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 DTHD1Q6ZMT9 781 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 PAGE5Q96GU1 130 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 AK8Q96MA6 479 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 GPCPD1Q9NPB8 672 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 HOXC10Q9NYD6 342 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 FEM1BQ9UK73 627 aa14.47□□□□□ -0.09
SMARCB1-203ENST00000407082 LTBP2Q14767 1821 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 FRMPD3Q5JV73 1810 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 VWA3AA6NCI4 1184 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 KLRF2D3W0D1 207 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 GOLGA8HP0CJ92 632 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 RAG1P15918 1043 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 EPHB4P54760 987 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 CCZ1BP86790 482 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 CCZ1P86791 482 aaPredicted RBP14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 SPAG1Q07617 926 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 ZNF543Q08ER8 600 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 NPY5RQ15761 445 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 SPECC1Q5M775 1068 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 SPATA1Q5VX52 437 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 CEP135Q66GS9 1140 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 ISM2Q6H9L7 571 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 VSTM4Q8IW00 320 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 PDILTQ8N807 584 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 FBXO28Q9NVF7 368 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
SMARCB1-203ENST00000407082 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 ESYT2A0FGR8 921 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms