RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 USP17L13C9JLJ4 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L11C9JVI0 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L18D6R9N7 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L22D6RA61 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L17D6RBQ6 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L19D6RCP7 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L20D6RJB6 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 CEP104O60308 925 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 NDUFB10O96000 172 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TNNC2P02585 160 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 IVLP07476 585 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 KLRK1P26718 216 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MFAP3P55082 362 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L24Q0WX57 530 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 EPHA7Q15375 998 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SURF1Q15526 300 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ELF2Q15723 593 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ARHGAP44Q17R89 818 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TKFCQ3LXA3 575 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 EAPPQ56P03 285 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 NAALADL2Q58DX5 795 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L6PQ6QN14 398 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 RBM43Q6ZSC3 357 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 CCDC50Q8IVM0 306 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 DHX40Q8IX18 779 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MCPH1Q8NEM0 835 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 NT5C1BQ96P26 610 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 C7orf25Q9BPX7 421 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TIPINQ9BVW5 301 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 CPVLQ9H3G5 476 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SENP2Q9HC62 589 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TUFT1Q9NNX1 390 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 DAAM1Q9Y4D1 1078 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM208AQ9UK61 1670 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PARP4Q9UKK3 1724 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 A0A087WWV3 80 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ATP8B1O43520 1251 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MYCNP04198 464 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SERPING1P05155 500 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 HOXA13P31271 388 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PTPAQ15257 358 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 LRRC41Q15345 812 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 NTRK3Q16288 839 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 POTEDQ86YR6 584 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SAMD3Q8N6K7 520 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 NSUN6Q8TEA1 469 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TRIM11Q96F44 468 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM167AQ96KS9 214 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 CEP170P1Q96L14 293 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 BCL2L12Q9HB09 334 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SPC25Q9HBM1 224 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 KMT5AQ9NQR1 393 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TMEM260Q9NX78 707 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 POLLQ9UGP5 575 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TRPC6Q9Y210 931 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ATRNO75882 1429 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SPDYE4A6NLX3 237 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 C19orf81C9J6K1 198 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 POLRMTO00411 1230 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PRR29P0C7W0 189 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PRCPP42785 496 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 LMAN1P49257 510 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MAP2K1Q02750 393 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PPP1R7Q15435 360 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MOXD1Q6UVY6 613 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 GSTA5Q7RTV2 222 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SRGAP1Q7Z6B7 1085 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 RDH13Q8NBN7 331 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 IFT81Q8WYA0 676 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 POMGNT1Q8WZA1 660 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 CALR3Q96L12 384 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ADPGKQ9BRR6 497 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MRIQ9BWK5 157 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 VCPKMTQ9H867 229 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 KIAA1586Q9HCI6 787 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PARP2Q9UGN5 583 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 LIMA1Q9UHB6 759 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ZNF215Q9UL58 517 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 UTP11Q9Y3A2 253 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 IKBKGQ9Y6K9 419 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 COL14A1Q05707 1796 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 POTEMA6NI47 508 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM196BA6NMK8 535 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 SOCS7O14512 581 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RHOBTB3O94955 611 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 NDUFA10O95299 355 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TDP2O95551 362 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 EYA4O95677 639 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 P4HBP07237 508 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 EIF2AK2P19525 551 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 IBSPP21815 317 aaPredicted RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 FXR2P51116 673 aaKnown RBP eCLIP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 PDE6CP51160 858 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 UBXN2AP68543 259 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 DPYDQ12882 1025 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 COASYQ13057 564 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 MTMR3Q13615 1198 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 SLFN12LQ6IEE8 588 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms