RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 USP17L18D6R9N7 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L22D6RA61 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L17D6RBQ6 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L19D6RCP7 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L20D6RJB6 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 CXCR5P32302 372 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 CACNB1Q02641 598 aaPredicted RBP10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L24Q0WX57 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L6PQ6QN14 398 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 LRRC31Q6UY01 552 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 EPM2AIP1Q7L775 607 aaPredicted RBP10.91□□□□□ -0.66
MSH2-202ENST00000406134 EHBP1Q8NDI1 1231 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 SPATA4Q8NEY3 305 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 CALCOCO1Q9P1Z2 691 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 RNF40O75150 1001 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 GGCXP38435 758 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 PSMC6P62333 389 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 TSEN2Q8NCE0 465 aaKnown RBP10.9□□□□□ -0.66
MSH2-202ENST00000406134 RPGRIP1Q96KN7 1286 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 SH3GL2Q99962 352 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 SERPINB13Q9UIV8 391 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 F8W031 263 aaPredicted RBP10.9□□□□□ -0.66
MSH2-202ENST00000406134 PHACTR2O75167 634 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 SPATA31C1P0DKV0 1188 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 ACTN2P35609 894 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 LMAN1P49257 510 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 GOLGA5Q8TBA6 731 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 IQCDQ96DY2 449 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 MS4A14Q96JA4 679 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 PACSIN1Q9BY11 444 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 TSGA10Q9BZW7 698 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 FAM204AQ9H8W3 233 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 COL4A3BPQ9Y5P4 624 aa10.9□□□□□ -0.66
MSH2-202ENST00000406134 SSU72P8A0A1W2PR75 194 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 FAM196BA6NMK8 535 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.67
MSH2-202ENST00000406134 SHOX2O60902 331 aaPredicted RBP10.9□□□□□ -0.67
MSH2-202ENST00000406134 TUBBP07437 444 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 KIF5AQ12840 1032 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 CCDC96Q2M329 555 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 SP8Q8IXZ3 490 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 TRIM58Q8NG06 486 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 ATP6V0A2Q9Y487 856 aa10.9□□□□□ -0.67
MSH2-202ENST00000406134 RIMBP2O15034 1052 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 SCNN1DP51172 638 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 QRICH1Q2TAL8 776 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 FKBP15Q5T1M5 1219 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 ANKRD13CQ8N6S4 541 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 MMRN2Q9H8L6 949 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 MED4Q9NPJ6 270 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 RBM12Q9NTZ6 932 aaKnown RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 PANK4Q9NVE7 773 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 TBC1D7Q9P0N9 293 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 CEP72Q9P209 647 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 ZMYM2Q9UBW7 1377 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 DDTLA6NHG4 134 aaPredicted RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 SLC7A5Q01650 507 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 RRP1BQ14684 758 aaKnown RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 CUL5Q93034 780 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 GJD4Q96KN9 370 aaPredicted RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 SUGT1Q9Y2Z0 365 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 TNFRSF8P28908 595 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 RASSF7Q02833 373 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 CKAP4Q07065 602 aaKnown RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 SYN2Q92777 582 aaPredicted RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 MKL1Q969V6 931 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 DRC1Q96MC2 740 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 PSMB7Q99436 277 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 EDEM3Q9BZQ6 932 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 COA1Q9GZY4 146 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 GBP3Q9H0R5 595 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 EHD4Q9H223 541 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 SIX2Q9NPC8 291 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 JADE2Q9NQC1 790 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 ZNHIT6Q9NWK9 470 aaKnown RBP10.89□□□□□ -0.67
MSH2-202ENST00000406134 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 PARP14Q460N5 1801 aa10.89□□□□□ -0.67
MSH2-202ENST00000406134 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 A0A087X0T9 212 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 ZSCAN5CA6NGD5 496 aaPredicted RBP10.88□□□□□ -0.67
MSH2-202ENST00000406134 PLA2G4BP0C869 781 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 FAM228BP0C875 321 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 TMEM266Q2M3C6 531 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 KRT79Q5XKE5 535 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 ARHGAP27Q6ZUM4 889 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
MSH2-202ENST00000406134 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 TMEM51Q9NW97 253 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 VAV3Q9UKW4 847 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 KIAA1024Q9UPX6 916 aa10.88□□□□□ -0.67
MSH2-202ENST00000406134 FAM86B1E9PN63 330 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms