RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CCDC114Q96M63 670 aa17.08■□□□□ 0.33
ATG4B-205ENST00000404914 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.33
ATG4B-205ENST00000404914 LEMD3Q9Y2U8 911 aa17.08■□□□□ 0.33
ATG4B-205ENST00000404914 RREB1Q92766 1687 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 RBAK-RBAKDNI3L0D1 243 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 MECOMQ03112 1051 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 CNNM4Q6P4Q7 775 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.32
ATG4B-205ENST00000404914 AP1M1Q9BXS5 423 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 CEP83Q9Y592 693 aa17.08■□□□□ 0.32
ATG4B-205ENST00000404914 KIF5BP33176 963 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 KCNK18Q7Z418 384 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 ADAMTS1Q9UHI8 967 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 SSU72P8A0A1W2PR75 194 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 PRPHP41219 470 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 POLR2FP61218 127 aaKnown RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 FAM83BQ5T0W9 1011 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CEP57Q86XR8 500 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 TPX2Q9ULW0 747 aaKnown RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 PRDX5P30044 214 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 TXKP42681 527 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 E2F5Q15329 346 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CCDC152Q4G0S7 254 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CCDC121Q6ZUS5 278 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CCDC84Q86UT8 332 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 KIRREL3Q8IZU9 778 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATG4B-205ENST00000404914 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 TMEM59LQ9UK28 342 aa17.07■□□□□ 0.32
ATG4B-205ENST00000404914 PHF20L1A8MW92 1017 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 ANKRD20A8PQ5CZ79 823 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 N4BP2L2Q92802 583 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-205ENST00000404914 LSM14BQ9BX40 385 aaKnown RBP17.06■□□□□ 0.32
ATG4B-205ENST00000404914 DDX47Q9H0S4 455 aaKnown RBP17.06■□□□□ 0.32
ATG4B-205ENST00000404914 PCDHGC5Q9Y5F6 944 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 CCDC88AQ3V6T2 1871 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 KCNK3O14649 394 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 ELF1P32519 619 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 RAPGEF5Q92565 580 aa17.06■□□□□ 0.32
ATG4B-205ENST00000404914 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 LAMB1P07942 1786 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 GCOM1H8Y6P7 765 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-205ENST00000404914 MYZAPP0CAP1 466 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 GRM4Q14833 912 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 SFMBT2Q5VUG0 894 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 FAM133AQ8N9E0 248 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 SEC16BQ96JE7 1060 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 ISCUQ9H1K1 167 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
ATG4B-205ENST00000404914 POTEMA6NI47 508 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
ATG4B-205ENST00000404914 ITGA4P13612 1032 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 CTNNA1P35221 906 aaKnown RBP17.05■□□□□ 0.32
ATG4B-205ENST00000404914 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
ATG4B-205ENST00000404914 ITPK1Q13572 414 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 NEDD9Q14511 834 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 SLC9C1Q4G0N8 1177 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 PARP9Q8IXQ6 854 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 DAGLBQ8NCG7 672 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 MDM1Q8TC05 714 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 RNF14Q9UBS8 474 aa17.05■□□□□ 0.32
ATG4B-205ENST00000404914 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-205ENST00000404914 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 FAM170AA1A519 330 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 C21orf2O43822 256 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 SIK1P57059 783 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 RAPGEF1Q13905 1077 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 COBLL1Q53SF7 1204 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 UNC13DQ70J99 1090 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 GJA10Q969M2 543 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 AK8Q96MA6 479 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 SCLT1Q96NL6 688 aa17.04■□□□□ 0.32
ATG4B-205ENST00000404914 MAGEF1Q9HAY2 307 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms