RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DHX15O43143 795 aaKnown RBP37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 GGPS1O95749 300 aa37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 MYCP01106 439 aaPredicted RBP37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 NEDD9Q14511 834 aa37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 LRCH2Q5VUJ6 765 aa37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 CYFIP1Q7L576 1253 aa37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 SLFN12Q8IYM2 578 aa37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 LINC00301Q8NCQ3 95 aa37.62■■■■□ 3.61
CSNK1E-204ENST00000403904 DDX39AO00148 427 aaKnown RBP37.61■■■■□ 3.61
CSNK1E-204ENST00000403904 LAD1O00515 517 aa37.61■■■■□ 3.61
CSNK1E-204ENST00000403904 SLC39A14Q15043 492 aa37.61■■■■□ 3.61
CSNK1E-204ENST00000403904 STK38Q15208 465 aa37.61■■■■□ 3.61
CSNK1E-204ENST00000403904 SDF4Q9BRK5 362 aa37.61■■■■□ 3.61
CSNK1E-204ENST00000403904 TBC1D22BQ9NU19 505 aa37.61■■■■□ 3.61
CSNK1E-204ENST00000403904 GAS7O60861 476 aa37.6■■■■□ 3.61
CSNK1E-204ENST00000403904 PSMD10O75832 226 aa37.6■■■■□ 3.61
CSNK1E-204ENST00000403904 RIT2Q99578 217 aa37.6■■■■□ 3.61
CSNK1E-204ENST00000403904 GNEQ9Y223 722 aaKnown RBP37.6■■■■□ 3.61
CSNK1E-204ENST00000403904 YEATS4O95619 227 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 MARCKSP29966 332 aaPredicted RBP37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 MTFR1Q15390 333 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 CELF3Q5SZQ8 465 aaKnown RBP37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 DHX37Q8IY37 1157 aaKnown RBP37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 GIMAP8Q8ND71 665 aaPredicted RBP37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 TTC12Q9H892 705 aaPredicted RBP37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 NFASCO94856 1347 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 NKRFO15226 690 aaKnown RBP eCLIP37.59■■■■□ 3.617e-9■■■□□ 16.7
CSNK1E-204ENST00000403904 MCOLN1Q9GZU1 580 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 UNC93B1Q9H1C4 597 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 MLXIPQ9HAP2 919 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 PCDHA12Q9UN75 941 aa37.59■■■■□ 3.61
CSNK1E-204ENST00000403904 FARP2O94887 1054 aaPredicted RBP37.58■■■■□ 3.61
CSNK1E-204ENST00000403904 GH1P01241 217 aa37.58■■■■□ 3.61
CSNK1E-204ENST00000403904 TEKT3Q9BXF9 490 aa37.58■■■■□ 3.61
CSNK1E-204ENST00000403904 PRPHP41219 470 aa37.57■■■■□ 3.6
CSNK1E-204ENST00000403904 SP4Q02446 784 aa37.57■■■■□ 3.6
CSNK1E-204ENST00000403904 ARHGAP1Q07960 439 aa37.57■■■■□ 3.6
CSNK1E-204ENST00000403904 IL17AQ16552 155 aa37.57■■■■□ 3.6
CSNK1E-204ENST00000403904 JPH1Q9HDC5 661 aaPredicted RBP37.57■■■■□ 3.6
CSNK1E-204ENST00000403904 TELO2Q9Y4R8 837 aa37.57■■■■□ 3.6
CSNK1E-204ENST00000403904 SPTLC2O15270 562 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 DYNC1LI2O43237 492 aaPredicted RBP37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 TECP42680 631 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 ARL6IP4Q66PJ3 421 aaKnown RBP37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 METTL7BQ6UX53 244 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 DTHD1Q6ZMT9 781 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 ZNF333Q96JL9 665 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 XRN2Q9H0D6 950 aaKnown RBP eCLIP37.56■■■■□ 3.62e-6■■■■□ 25.6
CSNK1E-204ENST00000403904 GDPD2Q9HCC8 539 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 SLC9A2Q9UBY0 812 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 DDX20Q9UHI6 824 aaKnown RBP37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 RCOR1Q9UKL0 485 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 VAV3Q9UKW4 847 aa37.56■■■■□ 3.6
CSNK1E-204ENST00000403904 DUSP11O75319 330 aaKnown RBP37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 RARBP10826 455 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 TLK2Q86UE8 772 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 OR6J1Q8NGC5 347 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 ARMC5Q96C12 935 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 SPATA32Q96LK8 384 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 POTEFA5A3E0 1075 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 CCL5P13501 91 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 LAMC2Q13753 1193 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 LEO1Q8WVC0 666 aaPredicted RBP37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 UNC45AQ9H3U1 944 aa37.55■■■■□ 3.6
CSNK1E-204ENST00000403904 VWA3AA6NCI4 1184 aa37.54■■■■□ 3.6
CSNK1E-204ENST00000403904 CHMP2AO43633 222 aa37.54■■■■□ 3.6
CSNK1E-204ENST00000403904 SPATA33Q96N06 139 aa37.54■■■■□ 3.6
CSNK1E-204ENST00000403904 SCAND2PQ9GZW5 306 aaPredicted RBP37.54■■■■□ 3.6
CSNK1E-204ENST00000403904 CCNE2O96020 404 aa37.53■■■■□ 3.6
CSNK1E-204ENST00000403904 SPIRE1Q08AE8 756 aa37.53■■■■□ 3.6
CSNK1E-204ENST00000403904 HSDL1Q3SXM5 330 aa37.53■■■■□ 3.6
CSNK1E-204ENST00000403904 KCNG4Q8TDN1 519 aa37.53■■■■□ 3.6
CSNK1E-204ENST00000403904 RNF208Q9H0X6 261 aa37.53■■■■□ 3.6
CSNK1E-204ENST00000403904 FBXO2Q9UK22 296 aaPredicted RBP37.53■■■■□ 3.6
CSNK1E-204ENST00000403904 GRIN1Q05586 938 aa37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 TMEM266Q2M3C6 531 aa37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 B3GNT9Q6UX72 402 aa37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 EMID1Q96A84 441 aaPredicted RBP37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 TCEAL9Q9UHQ7 104 aa37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 Q9Y3F1 56 aa37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 MORC2Q9Y6X9 1032 aaPredicted RBP37.52■■■■□ 3.6
CSNK1E-204ENST00000403904 PPP6R2O75170 966 aa37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 FXR2P51116 673 aaKnown RBP eCLIP37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 IRX5P78411 483 aaPredicted RBP37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 KRT76Q01546 638 aa37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 PPP2R5CQ13362 524 aa37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 AFG1LQ8WV93 481 aa37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 AP5M1Q9H0R1 490 aa37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 PAK6Q9NQU5 681 aaPredicted RBP37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 SRPRBQ9Y5M8 271 aaKnown RBP37.51■■■■□ 3.6
CSNK1E-204ENST00000403904 POTEMA6NI47 508 aa37.51■■■■□ 3.59
CSNK1E-204ENST00000403904 MSCO60682 206 aa37.51■■■■□ 3.59
CSNK1E-204ENST00000403904 LHX8Q68G74 356 aa37.51■■■■□ 3.59
CSNK1E-204ENST00000403904 NCAPH2Q6IBW4 605 aa37.51■■■■□ 3.59
CSNK1E-204ENST00000403904 FERMT2Q96AC1 680 aa37.51■■■■□ 3.59
CSNK1E-204ENST00000403904 XPNPEP3Q9NQH7 507 aa37.51■■■■□ 3.59
CSNK1E-204ENST00000403904 SYNRGQ9UMZ2 1314 aa37.5■■■■□ 3.59
CSNK1E-204ENST00000403904 PGK1P00558 417 aa37.5■■■■□ 3.59
CSNK1E-204ENST00000403904 ACTR2P61160 394 aa37.5■■■■□ 3.59
CSNK1E-204ENST00000403904 ZNF746Q6NUN9 644 aaPredicted RBP37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 1014 ms