RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CFAP221Q4G0U5 840 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 TCERG1LQ5VWI1 586 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 MAATS1Q7Z4T9 603 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
RBM39-206ENST00000403542 FAM169AQ9Y6X4 670 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 EBAG9O00559 213 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 RFC4P35249 363 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 CASP5P51878 434 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 EPHB4P54760 987 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 GTF2IP78347 998 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 DCAF17Q5H9S7 520 aaPredicted RBP13.2□□□□□ -0.3
RBM39-206ENST00000403542 FBXW10Q5XX13 1052 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 ADGRF4Q8IZF3 695 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 HAS1Q92839 578 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 BCCIPQ9P287 314 aaKnown RBP eCLIP13.2□□□□□ -0.3
RBM39-206ENST00000403542 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
RBM39-206ENST00000403542 SNED1Q8TER0 1413 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 SLC9A1P19634 815 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 SEC24CP53992 1094 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 FKBP3Q00688 224 aaKnown RBP13.19□□□□□ -0.3
RBM39-206ENST00000403542 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 ADAT2Q7Z6V5 191 aaKnown RBP13.19□□□□□ -0.3
RBM39-206ENST00000403542 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 LDHCP07864 332 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
RBM39-206ENST00000403542 CACNB3P54284 484 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 CDK17Q00537 523 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 ADAM9Q13443 819 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 GJB7Q6PEY0 223 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
RBM39-206ENST00000403542 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 SFI1A8K8P3 1242 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 CYP4A11Q02928 519 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 LRRC63Q05C16 580 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 SLC20A2Q08357 652 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 PABPC4Q13310 644 aaKnown RBP eCLIP13.18□□□□□ -0.37e-8■■■■□ 22.3
RBM39-206ENST00000403542 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 CASKIN2Q8WXE0 1202 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 JMJD4Q9H9V9 463 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 PCNTO95613 3336 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 SHTN1A0MZ66 631 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 RAD51CO43502 376 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 CEP104O60308 925 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 RHBDL3P58872 404 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 PSMC6P62333 389 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 NAA35Q5VZE5 725 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 STK17AQ9UEE5 414 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 KIAA1551Q9HCM1 1747 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 EIF3HO15372 352 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■□□□□ 10.1
RBM39-206ENST00000403542 IBSPP21815 317 aaPredicted RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 GRAPQ13588 217 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
RBM39-206ENST00000403542 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
RBM39-206ENST00000403542 CLIC2O15247 247 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 OPA1O60313 960 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 NR2F2P24468 414 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.37e-33■■□□□ 11.8
RBM39-206ENST00000403542 PPP4CP60510 307 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 PTK2Q05397 1052 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 PPM1EQ8WY54 764 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 KAT2BQ92831 832 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 SPAG5Q96R06 1193 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
RBM39-206ENST00000403542 PSTPIP2Q9H939 334 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 IRS2Q9Y4H2 1338 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms