RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 LZTFL1Q9NQ48 299 aa17.78■□□□□ 0.44
CHRFAM7A-203ENST00000401522 RLFQ13129 1914 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 DSG3P32926 999 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TUBB4BP68371 445 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 CYP26C1Q6V0L0 522 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PIGSQ96S52 555 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 ABHD10Q9NUJ1 306 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 TAB2Q9NYJ8 693 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 PARP14Q460N5 1801 aa17.77■□□□□ 0.44
CHRFAM7A-203ENST00000401522 BTBD19C9JJ37 291 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZBTB5O15062 677 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 FDX1P10109 184 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 NOGQ13253 232 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PAXIP1Q6ZW49 1069 aaPredicted RBP17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ADSSL1Q8N142 457 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CEP112Q8N8E3 955 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 VPS16Q9H269 839 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 BAZ2BQ9UIF8 2168 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 OSBPP22059 807 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PRPHP41219 470 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PRCPP42785 496 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PLA2G4AP47712 749 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CC2D1AQ6P1N0 951 aaPredicted RBP17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CAPNS2Q96L46 248 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CCSER1Q9C0I3 900 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 MAGEF1Q9HAY2 307 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 MYO1AQ9UBC5 1043 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SEC63Q9UGP8 760 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CDC23Q9UJX2 597 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PCDHA6Q9UN73 950 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PCDHA8Q9Y5H6 950 aa17.76■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PDHXO00330 501 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 VWA5AO00534 786 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 TM4SF4P48230 202 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 STIM1Q13586 685 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 LBX2Q6XYB7 198 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 P2RX7Q99572 595 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CUEDC2Q9H467 287 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SLC38A10Q9HBR0 1119 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 BARHL2Q9NY43 387 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PNMA3Q9UL41 463 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 GDAQ9Y2T3 454 aa17.75■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CTAGE9A4FU28 777 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 POTEB2H3BUK9 544 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 STXBP3O00186 592 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 COBLO75128 1261 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 EEF1GP26641 437 aaKnown RBP17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 UBA7P41226 1012 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SREBF2Q12772 1141 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZNF569Q5MCW4 686 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 NOC3LQ8WTT2 800 aaKnown RBP17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 IRX2Q9BZI1 471 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 THAP9Q9H5L6 903 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ARFGAP3Q9NP61 516 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 C1QTNF8P60827 252 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ERVK-24P63145 666 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 UBXN1Q04323 297 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 QRICH1Q2TAL8 776 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 NAALADL2Q58DX5 795 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 TYW1BQ6NUM6 668 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 HEATR3Q7Z4Q2 680 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 REM2Q8IYK8 340 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ATG4CQ96DT6 458 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZIC5Q96T25 663 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PARD6BQ9BYG5 372 aa17.74■□□□□ 0.43
CHRFAM7A-203ENST00000401522 A0A1W2PQC6 194 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 LGALS16A8MUM7 142 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZBED4O75132 1171 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SNAP25P60880 206 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 HERVK_113P62684 666 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 GRM1Q13255 1194 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 BRD3Q15059 726 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 IFNL1Q8IU54 200 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 KBTBD4Q9NVX7 518 aa17.73■□□□□ 0.43
CHRFAM7A-203ENST00000401522 hCG_1984214I3L0E3 225 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 IGF2BP3O00425 579 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PSMA7O14818 248 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 PPP1R11O60927 126 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 RHOBTB3O94955 611 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 SEC31AO94979 1220 aaKnown RBP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 TBC1D8O95759 1140 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 CDC25AP30304 524 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 KRT9P35527 623 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 INF2Q27J81 1249 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 IRF2BP1Q8IU81 584 aa17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 ZNF713Q8N859 430 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-203ENST00000401522 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms