RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 SLC9C1Q4G0N8 1177 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 MAATS1Q7Z4T9 603 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 COL4A3BPQ9Y5P4 624 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 ROBO1Q9Y6N7 1651 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 EBAG9O00559 213 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 KCNK3O14649 394 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 SCNN1DP51172 638 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 KLHL30Q0D2K2 578 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 DCAF17Q5H9S7 520 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 FIGNQ5HY92 759 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 HAS1Q92839 578 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 CD209Q9NNX6 404 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 GRIN2DO15399 1336 aa11.65□□□□□ -0.54
PPP4R1-203ENST00000400556 POTEFA5A3E0 1075 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 NDUFAB1O14561 156 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 POTEIP0CG38 1075 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 SLC9A1P19634 815 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 IBSPP21815 317 aaPredicted RBP11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 CFAP58Q5T655 872 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 GJB7Q6PEY0 223 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 POTEGQ6S5H5 508 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 C16orf86Q6ZW13 317 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 ADAT2Q7Z6V5 191 aaKnown RBP11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 BCCIPQ9P287 314 aaKnown RBP eCLIP11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 PCDHA12Q9UN75 941 aa11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.55
PPP4R1-203ENST00000400556 CACNB3P54284 484 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 GTF2IP78347 998 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 ZNF804AQ7Z570 1209 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 GPBP1Q86WP2 473 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 CASKIN2Q8WXE0 1202 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 DNAJC19Q96DA6 116 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 ZNF233A6NK53 670 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 TMCO5BA8MYB1 307 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 HNRNPH3P31942 346 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 CYP4A11Q02928 519 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 SLC20A2Q08357 652 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 ASTE1Q2TB18 679 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 ZNF662Q6ZS27 426 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 KAT2BQ92831 832 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 RNPC3Q96LT9 517 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 MAGEF1Q9HAY2 307 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 RAD51CO43502 376 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 CDK17Q00537 523 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 TRIM31Q9BZY9 425 aa11.64□□□□□ -0.55
PPP4R1-203ENST00000400556 EIF3HO15372 352 aaKnown RBP eCLIP11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 LDHCP07864 332 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 RFC4P35249 363 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 PSMC6P62333 389 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 GSTO1P78417 241 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.559e-6■■■■□ 24.7
PPP4R1-203ENST00000400556 ADAM9Q13443 819 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 LAMB1P07942 1786 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 SHTN1A0MZ66 631 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 CEP104O60308 925 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 RHBDL3P58872 404 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 LRRC63Q05C16 580 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 TADA2BQ86TJ2 420 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 PVALEFA0A1B0GWK0 134 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 CLIC2O15247 247 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 CEP85LQ5SZL2 805 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 RAB34Q9BZG1 259 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 DDX47Q9H0S4 455 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 DDX4Q9NQI0 724 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 MTMR4Q9NYA4 1195 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
PPP4R1-203ENST00000400556 IRS2Q9Y4H2 1338 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 OPA1O60313 960 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 PTK2Q05397 1052 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 KCNA1Q09470 495 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 CNBD1Q8NA66 436 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 SCFD1Q8WVM8 642 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 SPAG5Q96R06 1193 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 ZNF287Q9HBT7 754 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 GRID2IPA4D2P6 1211 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 FGFR1OPO95684 399 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 PLA2G4BP0C869 781 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 NR2F2P24468 414 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 COPB2P35606 906 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.553e-9■■■■■ 34.7
PPP4R1-203ENST00000400556 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
PPP4R1-203ENST00000400556 PPM1EQ8WY54 764 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms