RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
SKA3-203ENST00000400018 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 TRPA1O75762 1119 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 ALDH5A1P51649 535 aaPredicted RBP13.14□□□□□ -0.31
SKA3-203ENST00000400018 SOX10P56693 466 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 FKBP1BP68106 108 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 POSTNQ15063 836 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 FGFBP2Q9BYJ0 223 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 RABGAP1Q9Y3P9 1069 aa13.14□□□□□ -0.31
SKA3-203ENST00000400018 SPATA31C1P0DKV0 1188 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 ZBTB48P10074 688 aaPredicted RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 LONP1P36776 959 aaKnown RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 ARL6IP4Q66PJ3 421 aaKnown RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 OTOP1Q7RTM1 612 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 VSIG10LQ86VR7 867 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 CYP2B6P20813 491 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 ZNF445P59923 1031 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 DPYDQ12882 1025 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 KCTD2Q14681 263 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 TRIM50Q86XT4 487 aa13.13□□□□□ -0.31
SKA3-203ENST00000400018 NSUN6Q8TEA1 469 aaKnown RBP13.13□□□□□ -0.31
SKA3-203ENST00000400018 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.12□□□□□ -0.31
SKA3-203ENST00000400018 PSMD10O75832 226 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 FCER1AP12319 257 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 CD44P16070 742 aaKnown RBP13.12□□□□□ -0.31
SKA3-203ENST00000400018 CYP3A7P24462 503 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 Q4G0T1 1027 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
SKA3-203ENST00000400018 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
SKA3-203ENST00000400018 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 CYP3A4P08684 503 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 CIITAP33076 1130 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 LRRC41Q15345 812 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 PLA2G4FQ68DD2 849 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 MAN1B1Q9UKM7 699 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 UBIAD1Q9Y5Z9 338 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 MYMKA6NI61 221 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
SKA3-203ENST00000400018 IDEP14735 1019 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 PTMSP20962 102 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 ANKRD23Q86SG2 305 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 ARID3AQ99856 593 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
SKA3-203ENST00000400018 ADCY6O43306 1168 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 CYP2C19P33261 490 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
SKA3-203ENST00000400018 OAZ1P54368 228 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 NPEPPSP55786 919 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 DPP9Q86TI2 863 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 CBX8Q9HC52 389 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 SLITRK3O94933 977 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 BMP15O95972 392 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 MARK3P27448 753 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 PRPHP41219 470 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 KSR1Q8IVT5 923 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 IQUBQ8NA54 791 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 CHST13Q8NET6 341 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 ZNF668Q96K58 619 aaPredicted RBP13.11□□□□□ -0.31
SKA3-203ENST00000400018 MED15Q96RN5 788 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
SKA3-203ENST00000400018 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
SKA3-203ENST00000400018 GCFC2P16383 781 aaKnown RBP13.1□□□□□ -0.31
SKA3-203ENST00000400018 CCND2P30279 289 aa13.1□□□□□ -0.31
SKA3-203ENST00000400018 VEGFBP49765 207 aa13.1□□□□□ -0.31
SKA3-203ENST00000400018 PDE4DQ08499 809 aa13.1□□□□□ -0.31
SKA3-203ENST00000400018 TRIM32Q13049 653 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms