RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 RNF208Q9H0X6 261 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 KCNH7Q9NS40 1196 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 IGSF9BQ9UPX0 1349 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 FAM86B1E9PN63 330 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 BAG4O95429 457 aaKnown RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 FAM86B2P0C5J1 330 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 XRCC6P12956 609 aaKnown RBP eCLIP8.53□□□□□ -1.041e-10■■■□□ 19.2
USP16-204ENST00000399976 RESTQ13127 1097 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 FSCN1Q16658 493 aaKnown RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 DGKDQ16760 1214 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 FCHSD1Q86WN1 690 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 MTG1Q9BT17 334 aaPredicted RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 TMEM260Q9NX78 707 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 ZHX1Q9UKY1 873 aaPredicted RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 A0A0U1RQG5 324 aaPredicted RBP8.52□□□□□ -1.04
USP16-204ENST00000399976 hCG_1642624A0A1W2PR95 340 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 STX6O43752 255 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 PARNO95453 639 aaKnown RBP8.52□□□□□ -1.04
USP16-204ENST00000399976 ADCYAP1R1P41586 468 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 CDK7P50613 346 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 TRIM32Q13049 653 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 PLA2G4DQ86XP0 818 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 OR6J1Q8NGC5 347 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 KCNN1Q92952 543 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 FAM167AQ96KS9 214 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 AK8Q96MA6 479 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 AIFM3Q96NN9 605 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 GPR20Q99678 358 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.04
USP16-204ENST00000399976 SLC9A2Q9UBY0 812 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 TCEAL9Q9UHQ7 104 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 MTMR6Q9Y217 621 aa8.52□□□□□ -1.04
USP16-204ENST00000399976 ARIH2O95376 493 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 TAL1P17542 331 aaPredicted RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 SYT1P21579 422 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 MTFR1Q15390 333 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 JAKMIP3Q5VZ66 844 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 NECAB2Q7Z6G3 386 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 SEPT1Q8WYJ6 367 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 HTATIP2Q9BUP3 242 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 TEKT3Q9BXF9 490 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 C11orf49Q9H6J7 331 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 DDX25Q9UHL0 483 aaKnown RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 KCNJ14Q9UNX9 436 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 ATP6V1DQ9Y5K8 247 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 WDR64B1ANS9 1081 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 BTBD18B2RXH4 712 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 H3BQV1 296 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 IPO5O00410 1097 aaKnown RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 ADCY6O43306 1168 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 NASPP49321 788 aaPredicted RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 NUCB2P80303 420 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 ATP2C1P98194 919 aaPredicted RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 HYIQ5T013 277 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 FAM160B1Q5W0V3 765 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 ABHD15Q6UXT9 468 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 DHX37Q8IY37 1157 aaKnown RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 C4orf32Q8N8J7 132 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.05
USP16-204ENST00000399976 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
USP16-204ENST00000399976 KAT6AQ92794 2004 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 MSH4O15457 936 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 NEMFO60524 1076 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 BRD1O95696 1058 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 SCP2P22307 547 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 ACLYP53396 1101 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 SPIRE1Q08AE8 756 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 TTC38Q5R3I4 469 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 OXER1Q8TDS5 423 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 DEFB118Q96PH6 123 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 RAB34Q9BZG1 259 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 SMARCAD1Q9H4L7 1026 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
USP16-204ENST00000399976 MAFBQ9Y5Q3 323 aaPredicted RBP8.51□□□□□ -1.05
USP16-204ENST00000399976 YEATS4O95619 227 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 GGPS1O95749 300 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 MYCLP12524 364 aaPredicted RBP8.51□□□□□ -1.05
USP16-204ENST00000399976 ZNF76P36508 570 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 MIS18BP1Q6P0N0 1132 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 PIK3AP1Q6ZUJ8 805 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 ZNF577Q9BSK1 485 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 TUFT1Q9NNX1 390 aa8.51□□□□□ -1.05
USP16-204ENST00000399976 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 POTEFA5A3E0 1075 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 GAS2O43903 313 aaKnown RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 PSAPP07602 524 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 SUPT20HL2P0C7V6 817 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 ZSCAN22P10073 491 aaPredicted RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 SP2Q02086 613 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 ITGB3BPQ13352 177 aaPredicted RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 EPHA7Q15375 998 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 INF2Q27J81 1249 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 IGSF22Q8N9C0 903 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 ZNF579Q8NAF0 562 aaKnown RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms