RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SLC39A2Q9NP94 309 aa18.76■□□□□ 0.59
PTPRA-205ENST00000399903 DCP1AQ9NPI6 582 aaPredicted RBP18.76■□□□□ 0.59
PTPRA-205ENST00000399903 KCNK3O14649 394 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 HSD17B3P37058 310 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 PHF20Q9BVI0 1012 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 RNF26Q9BY78 433 aaPredicted RBP18.75■□□□□ 0.59
PTPRA-205ENST00000399903 THAP9Q9H5L6 903 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 SLC10A5Q5PT55 438 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 KLHDC7AQ5VTJ3 777 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 UHMK1Q8TAS1 419 aaKnown RBP18.75■□□□□ 0.59
PTPRA-205ENST00000399903 FAM167BQ9BTA0 163 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 DPH5Q9H2P9 285 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 C4BP0C0L5 1744 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 SRCAPQ6ZRS2 3230 aa18.75■□□□□ 0.59
PTPRA-205ENST00000399903 EME2A4GXA9 379 aaPredicted RBP18.74■□□□□ 0.59
PTPRA-205ENST00000399903 TMCO5BA8MYB1 307 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 CEP104O60308 925 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 KIF4AO95239 1232 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 GPKOWQ92917 476 aaPredicted RBP eCLIP18.74■□□□□ 0.59
PTPRA-205ENST00000399903 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 CNOT8Q9UFF9 292 aaKnown RBP18.74■□□□□ 0.59
PTPRA-205ENST00000399903 STK4Q13043 487 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 MAEAQ7L5Y9 396 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 TAX1BP1Q86VP1 789 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 CCDC63Q8NA47 563 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 PURBQ96QR8 312 aaKnown RBP18.74■□□□□ 0.59
PTPRA-205ENST00000399903 YIPF3Q9GZM5 350 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 MYH2Q9UKX2 1941 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 CTNND1O60716 968 aaKnown RBP18.74■□□□□ 0.59
PTPRA-205ENST00000399903 IFNAR2P48551 515 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 PLCB4Q15147 1175 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 SEC23AQ15436 765 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 ZBTB10Q96DT7 871 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 DUSP9Q99956 384 aaKnown RBP18.74■□□□□ 0.59
PTPRA-205ENST00000399903 CPVLQ9H3G5 476 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 TMBIM4Q9HC24 238 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 STK38LQ9Y2H1 464 aa18.74■□□□□ 0.59
PTPRA-205ENST00000399903 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
PTPRA-205ENST00000399903 TSPY2A6NKD2 308 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 TTI2Q6NXR4 508 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 C6orf89Q6UWU4 347 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 DTHD1Q6ZMT9 781 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 TMTC2Q8N394 836 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 P2RX5Q93086 422 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 CCDC47Q96A33 483 aaKnown RBP18.73■□□□□ 0.59
PTPRA-205ENST00000399903 DISC1Q9NRI5 854 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 FBXL5Q9UKA1 691 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 ATXN2Q99700 1313 aaKnown RBP18.73■□□□□ 0.59
PTPRA-205ENST00000399903 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
PTPRA-205ENST00000399903 ATP6V1G2O95670 118 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 GLE1Q53GS7 698 aaKnown RBP18.73■□□□□ 0.59
PTPRA-205ENST00000399903 MAPKAPK5Q8IW41 473 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 SH3RF3Q8TEJ3 882 aaPredicted RBP18.73■□□□□ 0.59
PTPRA-205ENST00000399903 TTYH3Q9C0H2 523 aa18.73■□□□□ 0.59
PTPRA-205ENST00000399903 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 TGFBRAP1Q8WUH2 860 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 GDF3Q9NR23 364 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 CD2APQ9Y5K6 639 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 VIMP08670 466 aaKnown RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 MRPL12P52815 198 aaKnown RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 PRR5LQ6MZQ0 368 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 DDX47Q9H0S4 455 aaKnown RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 USP17L3A6NCW0 530 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 USP17L4A6NCW7 530 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 TRAPPC3O43617 180 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 PPP2R2AP63151 447 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 TNNC1P63316 161 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 ELF3P78545 371 aaPredicted RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 KCNB1Q14721 858 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 USP17L1Q7RTZ2 530 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 ADAT2Q7Z6V5 191 aaKnown RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 EGFL6Q8IUX8 553 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 RPGRQ92834 1020 aaKnown RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 CRNKL1Q9BZJ0 848 aaKnown RBP18.72■□□□□ 0.59
PTPRA-205ENST00000399903 ATP6V0A4Q9HBG4 840 aa18.72■□□□□ 0.59
PTPRA-205ENST00000399903 UFL1O94874 794 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 FLT3P36888 993 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 WHAMMQ8TF30 809 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 ZNF526Q8TF50 670 aaPredicted RBP18.71■□□□□ 0.59
PTPRA-205ENST00000399903 DIAPH2O60879 1101 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 ANP32DO95626 131 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 RC3H1Q5TC82 1133 aaKnown RBP18.71■□□□□ 0.59
PTPRA-205ENST00000399903 DYMQ7RTS9 669 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 FAM114A1Q8IWE2 563 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 ARMC2Q8NEN0 867 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 CUL5Q93034 780 aa18.71■□□□□ 0.59
PTPRA-205ENST00000399903 ERVK-9P63128 1117 aa18.71■□□□□ 0.58
PTPRA-205ENST00000399903 GPSM2P81274 684 aa18.71■□□□□ 0.58
PTPRA-205ENST00000399903 DRP2Q13474 957 aa18.71■□□□□ 0.58
PTPRA-205ENST00000399903 RETREG2Q8NC44 543 aa18.71■□□□□ 0.58
PTPRA-205ENST00000399903 ELAC2Q9BQ52 826 aaKnown RBP18.71■□□□□ 0.58
PTPRA-205ENST00000399903 ANKRD2Q9GZV1 360 aa18.71■□□□□ 0.58
PTPRA-205ENST00000399903 PLAGL2Q9UPG8 496 aa18.71■□□□□ 0.58
PTPRA-205ENST00000399903 ZNF844Q08AG5 666 aa18.7■□□□□ 0.58
PTPRA-205ENST00000399903 KIAA0753Q2KHM9 967 aa18.7■□□□□ 0.58
PTPRA-205ENST00000399903 KCNV2Q8TDN2 545 aa18.7■□□□□ 0.58
PTPRA-205ENST00000399903 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms