RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 DDHD2O94830 711 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 ARL4AP40617 200 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 TTLL4Q14679 1199 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 OR6B2Q6IFH4 312 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 IFT43Q96FT9 208 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 C6orf203Q9P0P8 240 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 PTPRTO14522 1441 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 RGS12O14924 1447 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 GOLGA8SH3BPF8 625 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 IRF1P10914 325 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 KIAA1755Q5JYT7 1200 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 SFMBT2Q5VUG0 894 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 TRIML1Q8N9V2 468 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
CACNA1C-216ENST00000399638 A0A0G2JLW4 131 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 CEP104O60308 925 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 MMEL1Q495T6 779 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 MAN1C1Q9NR34 630 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 GSTA4O15217 222 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 SERPIND1P05546 499 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 LONP1P36776 959 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 MAGEB10Q96LZ2 347 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 BCORL1Q5H9F3 1711 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 PFDN1O60925 122 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 CTSHP09668 335 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 CDC25BP30305 580 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 FCGRTP55899 365 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 DIS3L2Q8IYB7 885 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 EXT2Q93063 718 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 KRT17Q04695 432 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 POSTNQ15063 836 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 THEMIS2Q5TEJ8 643 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 MAP7D3Q8IWC1 876 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 BTN2A2Q8WVV5 523 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 TM6SF1Q9BZW5 370 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 PI4KBQ9UBF8 816 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 PCDHB7Q9Y5E2 793 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 ANKRD42Q8N9B4 389 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 ZBTB38Q8NAP3 1195 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 RAVER2Q9HCJ3 691 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 ATP11BQ9Y2G3 1177 aa11.85□□□□□ -0.51
CACNA1C-216ENST00000399638 PYGLP06737 847 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 CPA1P15085 419 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 CD58P19256 250 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 NCOA5Q9HCD5 579 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 MYOM2P54296 1465 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 TADA2AO75478 443 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 ZNF75DP51815 510 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 PPP2R3AQ06190 1150 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 MUM1Q2TAK8 710 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 RIC8AQ9NPQ8 531 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 MED7O43513 233 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 ZBTB17Q13105 803 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 CUL4AQ13619 759 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 GTF2H3Q13889 308 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 IQANK1A0A1B0GTG1 560 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 PHBP35232 272 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 SERPINB6P35237 376 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 PTGDRQ13258 359 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 ZC3H12BQ5HYM0 836 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 TTC19Q6DKK2 380 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 KLHL7Q8IXQ5 586 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 SYCE1Q8N0S2 351 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 STAMQ92783 540 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 PARK7Q99497 189 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 RARBP10826 455 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 STXBP2Q15833 593 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 PTPROQ16827 1216 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 TCP11Q8WWU5 503 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 NELFBQ8WX92 580 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
CACNA1C-216ENST00000399638 OCRLQ01968 901 aa11.83□□□□□ -0.51
CACNA1C-216ENST00000399638 SLFNL1Q499Z3 407 aa11.83□□□□□ -0.51
CACNA1C-216ENST00000399638 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.51
CACNA1C-216ENST00000399638 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.51
CACNA1C-216ENST00000399638 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.51
CACNA1C-216ENST00000399638 MAP3K15Q6ZN16 1313 aa11.83□□□□□ -0.51
CACNA1C-216ENST00000399638 TRPA1O75762 1119 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 CACNB3P54284 484 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 MYL7Q01449 175 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 NLRC4Q9NPP4 1024 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 GIMAP4Q9NUV9 329 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms