RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 PHBP35232 272 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 ADAM9Q13443 819 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 TUBB2AQ13885 445 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 ZSCAN30Q86W11 494 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 CELF1Q92879 486 aaKnown RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 TUBB2BQ9BVA1 445 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 TRPV6Q9H1D0 765 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 UBN2Q6ZU65 1347 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 STXBP3O00186 592 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 SKIP12755 728 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 CA4P22748 312 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 HOXA13P31271 388 aaPredicted RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 GARSP41250 739 aaKnown RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 PPP2R5CQ13362 524 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 SAMD15Q9P1V8 674 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 DBNLQ9UJU6 430 aaKnown RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 SERPINA10Q9UK55 444 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 PRPF3O43395 683 aaKnown RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 CPA1P15085 419 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 GCLCP48506 637 aaPredicted RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 ARHGAP15Q53QZ3 475 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 RNF187Q5TA31 235 aaPredicted RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 PPM1KQ8N3J5 372 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 TTC39CQ8N584 583 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 C16orf45Q96MC5 204 aaPredicted RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 IQGAP1P46940 1657 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 KIF1AQ12756 1690 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 CTNND1O60716 968 aaKnown RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 SNX17Q15036 470 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 HAUS6Q7Z4H7 955 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 DGKHQ86XP1 1220 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 EFHBQ8N7U6 833 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 CCDC110Q8TBZ0 833 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 CAPZA3Q96KX2 299 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 NKIRAS1Q9NYS0 192 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 FNDC3AQ9Y2H6 1198 aaKnown RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 SKILP12757 684 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 CYP2B6P20813 491 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 ARL4AP40617 200 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 EPHB1P54762 984 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 MARCH10Q8NA82 808 aaPredicted RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 SECISBP2LQ93073 1101 aaKnown RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 MAPK4P31152 587 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 PSMD2Q13200 908 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 FYB2Q5VWT5 728 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 DEFB132Q7Z7B7 95 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 PSPC1Q8WXF1 523 aaKnown RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 TIGD1Q96MW7 591 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 LCMT1Q9UIC8 334 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 CAPN15O75808 1086 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 CYBBP04839 570 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 RPN1P04843 607 aaKnown RBP8.65□□□□□ -1.02
USP47-203ENST00000399455 MYL1P05976 194 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 RALAP11233 206 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 SLC7A5P2Q9GIP4 190 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 ASIC3Q9UHC3 531 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 AMFRQ9UKV5 643 aa8.65□□□□□ -1.02
USP47-203ENST00000399455 HMGB1P1B2RPK0 211 aaPredicted RBP8.65□□□□□ -1.03
USP47-203ENST00000399455 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.03
USP47-203ENST00000399455 CPB1P15086 417 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 GPC3P51654 580 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 CHST13Q8NET6 341 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 SH3TC2Q8TF17 1288 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 U2AF1L4Q8WU68 220 aaKnown RBP8.65□□□□□ -1.03
USP47-203ENST00000399455 PNPLA6Q8IY17 1366 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 SNAP25P60880 206 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 BFSP2Q13515 415 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 P3H4Q92791 437 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 EDC3Q96F86 508 aaKnown RBP8.65□□□□□ -1.03
USP47-203ENST00000399455 KCNK9Q9NPC2 374 aa8.65□□□□□ -1.03
USP47-203ENST00000399455 TXNP10599 105 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 RNASE9P60153 205 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 AFG1LQ8WV93 481 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 RUNDC3BQ96NL0 473 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 MMTAG2Q9BU76 263 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 PIH1D3Q9NQM4 214 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 USP42Q9H9J4 1324 aaKnown RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 LRRIQ1Q96JM4 1722 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 EDEM3Q9BZQ6 932 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 TSTA3Q13630 321 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 MORC3Q14149 939 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 DGKDQ16760 1214 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 UBE2SQ16763 222 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 TTBK2Q6IQ55 1244 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 PEX26Q7Z412 305 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 OR6B3Q8NGW1 331 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 OTUD7AQ8TE49 926 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 UBLCP1Q8WVY7 318 aaPredicted RBP8.64□□□□□ -1.03
USP47-203ENST00000399455 FAM149B1Q96BN6 582 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 STRIP2Q9ULQ0 834 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 SLC4A7Q9Y6M7 1214 aa8.64□□□□□ -1.03
USP47-203ENST00000399455 OSTNP61366 133 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 286.3 ms