RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 PDE4DQ08499 809 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 PLS1Q14651 629 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 KRT31Q15323 416 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 MUM1L1Q5H9M0 696 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 SH3D19Q5HYK7 790 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 HYIQ5T013 277 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CEP135Q66GS9 1140 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 E4F1Q66K89 784 aaPredicted RBP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 SNRNP48Q6IEG0 339 aaKnown RBP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 TTI2Q6NXR4 508 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 GADL1Q6ZQY3 521 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 ERO1BQ86YB8 467 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CLEC4DQ8WXI8 215 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 WNK4Q96J92 1243 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 FAM20AQ96MK3 541 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 DUSP9Q99956 384 aaKnown RBP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 TMX1Q9H3N1 280 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 ZNF408Q9H9D4 720 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 STK17AQ9UEE5 414 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CLSTN1O94985 981 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CCT6AP40227 531 aaKnown RBP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 OAZ1P54368 228 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 PPATQ06203 517 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 EHHADHQ08426 723 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CHADLQ6NUI6 762 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 NSMFQ6X4W1 530 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 SV2BQ7L1I2 683 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 TC2NQ8N9U0 490 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 ERMNQ8TAM6 284 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 CCDC47Q96A33 483 aaKnown RBP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 DNAJC19Q96DA6 116 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 MAP3K20Q9NYL2 800 aaKnown RBP10.53□□□□□ -0.72
LINC00243-201ENST00000399196 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
LINC00243-201ENST00000399196 KDM3AQ9Y4C1 1321 aa10.52□□□□□ -0.72
LINC00243-201ENST00000399196 COL11A1P12107 1806 aaPredicted RBP10.52□□□□□ -0.73
LINC00243-201ENST00000399196 LRRC10BA6NIK2 292 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 IRF6O14896 467 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 SPATA31C1P0DKV0 1188 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 ADKP55263 362 aaKnown RBP10.52□□□□□ -0.73
LINC00243-201ENST00000399196 PSMC6P62333 389 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 CEP55Q53EZ4 464 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 HAUS3Q68CZ6 603 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 RNF207Q6ZRF8 634 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 SAMD3Q8N6K7 520 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 DDX12PQ92771 950 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 C16orf45Q96MC5 204 aaPredicted RBP10.52□□□□□ -0.73
LINC00243-201ENST00000399196 FGFBP2Q9BYJ0 223 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 NT5C3AQ9H0P0 336 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 SLC39A2Q9NP94 309 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 TRMT1Q9NXH9 659 aaKnown RBP10.52□□□□□ -0.73
LINC00243-201ENST00000399196 LIMA1Q9UHB6 759 aaKnown RBP10.52□□□□□ -0.73
LINC00243-201ENST00000399196 VAV3Q9UKW4 847 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 KIAA1024Q9UPX6 916 aa10.52□□□□□ -0.73
LINC00243-201ENST00000399196 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 RNF225M0QZC1 329 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 EML1O00423 815 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 ZMYND10O75800 440 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 RPS6P62753 249 aaKnown RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 TCP11X2Q5H9J9 407 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 CST9Q5W186 159 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SPECC1LQ69YQ0 1117 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 ANKRD40Q6AI12 368 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 POTEGQ6S5H5 508 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 CATSPER3Q86XQ3 398 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 TEX13BQ9BXU2 312 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SEMA6BQ9H3T3 888 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 PRDM16Q9HAZ2 1276 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 EXOC1Q9NV70 894 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 TAB2Q9NYJ8 693 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 MYPNQ86TC9 1320 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 NPHP3-ACAD11A0A0J9YXS1 232 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SPDYE5A6NIY4 337 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 KCNJ18B7U540 433 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 CELF2O95319 508 aaKnown RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 YY1P25490 414 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 COPB1P53618 953 aaKnown RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 IRX3P78415 501 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SETQ01105 290 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 KCNJ12Q14500 433 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 TMEM132BQ14DG7 1078 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 UNC13DQ70J99 1090 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 CCAR2Q8N163 923 aaKnown RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 PROCA1Q8NCQ7 364 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 SRRTQ9BXP5 876 aaKnown RBP10.51□□□□□ -0.73
LINC00243-201ENST00000399196 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
LINC00243-201ENST00000399196 VPS16Q9H269 839 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms