RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 STAP2Q9UGK3 403 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 TSKSQ9UJT2 592 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 KRIT1O00522 736 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 PTPREP23469 700 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 ADAM9Q13443 819 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 KRT71Q3SY84 523 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 ODR4Q5SWX8 454 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 CACNA2D3Q8IZS8 1091 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 UHMK1Q8TAS1 419 aaKnown RBP15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 FAM196BA6NMK8 535 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 BTBD18B2RXH4 712 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 ELF1P32519 619 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 SH2D4BQ5SQS7 431 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 B4GALNT4Q76KP1 1039 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 DCLK2Q8N568 766 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 RASGRP4Q8TDF6 673 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 NUCKS1Q9H1E3 243 aaKnown RBP15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 RRAGDQ9NQL2 400 aaPredicted RBP15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 ADARB2Q9NS39 739 aaKnown RBP15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 FNDC3AQ9Y2H6 1198 aaKnown RBP15.52■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 RASSF7Q02833 373 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 PCDHB4Q9Y5E5 795 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 COL5A2P05997 1499 aaPredicted RBP15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 PLSCR1O15162 318 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 FCER1AP12319 257 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 NT5C2P49902 561 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 GOLGA8FQ08AF8 430 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 GOLGA8DPQ0D2H9 430 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 PKP1Q13835 747 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 SNRNP48Q6IEG0 339 aaKnown RBP15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 DPH5Q9H2P9 285 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 ZNF70Q9UC06 446 aaPredicted RBP15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 GBP1P32455 592 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 TTBK2Q6IQ55 1244 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 VCX3BQ9H321 246 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP32Q8NFA0 1604 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 SYMPKQ92797 1274 aaKnown RBP15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 USP28Q96RU2 1077 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 PLCB1Q9NQ66 1216 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 KMT5AQ9NQR1 393 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 ADALQ6DHV7 355 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 C7orf31Q8N865 590 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 AGBL3Q8NEM8 1001 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 OSBP2Q969R2 916 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 CEP170P1Q96L14 293 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 RAB17Q9H0T7 212 aa15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 RAVER2Q9HCJ3 691 aaKnown RBP15.51■□□□□ 0.07
PCDHA11-201ENST00000398640 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 RPN1P04843 607 aaKnown RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 GSTA1P08263 222 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 GSTA2P09210 222 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 VEGFAP15692 232 aaPredicted RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 SEPT2Q15019 361 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 LMCD1Q9NZU5 365 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 UTYO14607 1347 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 PPLO60437 1756 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 YY1P25490 414 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 TRMT2AQ8IZ69 625 aaKnown RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 COL4A3BPQ9Y5P4 624 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 A6NJR5 290 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 MEIS1O00470 390 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 PTGDRQ13258 359 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 RIC8AQ9NPQ8 531 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 LARSQ9P2J5 1176 aaKnown RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 BUB1BO60566 1050 aaPredicted RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 NFX1Q12986 1120 aaKnown RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 FAM149B1Q96BN6 582 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 PRDM5Q9NQX1 630 aaPredicted RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 GNAT1P11488 350 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 MUM1L1Q5H9M0 696 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
PCDHA11-201ENST00000398640 WDR46O15213 610 aaKnown RBP15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 SRGAP2CP0DJJ0 459 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 PDZD4Q76G19 769 aaPredicted RBP15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 CCDC68Q9H2F9 335 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 CASQ2O14958 399 aaPredicted RBP15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 CETPP11597 493 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 STX2P32856 288 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 MTMR3Q13615 1198 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 ANKRD20A3Q5VUR7 823 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 GOLGA5Q8TBA6 731 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 RIPOR2Q9Y4F9 1068 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 SAR1BQ9Y6B6 198 aa15.49■□□□□ 0.07
PCDHA11-201ENST00000398640 MAD1L1Q9Y6D9 718 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms