RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PGBD1Q96JS3 809 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 BEGAINQ9BUH8 593 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 COPRSQ9NQ92 184 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 IL20Q9NYY1 176 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 TMED5Q9Y3A6 229 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 SCN7AQ01118 1682 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 NDUFAB1O14561 156 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 PRMT3O60678 531 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 PFKFB2O60825 505 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 ALOX15P16050 662 aaPredicted RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 ROR1Q01973 937 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 NCBP1Q09161 790 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 CUL4BQ13620 913 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 PUM3Q15397 648 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 MFN1Q8IWA4 741 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 LRRC8AQ8IWT6 810 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 FSIP1Q8NA03 581 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 CACTINQ8WUQ7 758 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 RBM18Q96H35 190 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 MYD88Q99836 296 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 PAPOLBQ9NRJ5 636 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 TLR7Q9NYK1 1049 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 PFDN2Q9UHV9 154 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 RCOR1Q9UKL0 485 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 BIN1O00499 593 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 TUBB4AP04350 444 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 EPB42P16452 691 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 WEE1P30291 646 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 MRPL12P52815 198 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 AKAP17AQ02040 695 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 GCKRQ14397 625 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 SPATA1Q5VX52 437 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 NXNQ6DKJ4 435 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 C14orf80Q86SX3 495 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 PPFIBP1Q86W92 1011 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 SLC44A2Q8IWA5 706 aaPredicted RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 IFNL2Q8IZJ0 200 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 TTC5Q8N0Z6 440 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 NKAIN3Q8N8D7 197 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 SPERTQ8NA61 448 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 JPH3Q8WXH2 748 aaPredicted RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 RAPGEF4Q8WZA2 1011 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 FHDC1Q9C0D6 1143 aaPredicted RBP7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 KIF9Q9HAQ2 790 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 HELLSQ9NRZ9 838 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 FPGT-TNNI3KV9GXZ4 949 aa7.23□□□□□ -1.25
TM9SF4-202ENST00000398022 SPDYE2BA6NHP3 402 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CCDC69A6NI79 296 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SPDYE5A6NIY4 337 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 NEURL1BA8MQ27 555 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 POLR3GO15318 223 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SPDYE6P0CI01 402 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 GRK2P25098 689 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 STT3AP46977 705 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SPDYE2Q495Y8 402 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 FAM83BQ5T0W9 1011 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SWSAP1Q6NVH7 229 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 FBXO33Q7Z6M2 555 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 RAB11FIP4Q86YS3 637 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 ZNF397Q8NF99 534 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 PPP1R14BQ96C90 147 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 METTL22Q9BUU2 404 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CCDC113Q9H0I3 377 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CYP4F11Q9HBI6 524 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 NLRP2Q9NX02 1062 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 AIPL1Q9NZN9 384 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 KDM3BQ7LBC6 1761 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 ARPC4-TTLL3A0A0A6YYG9 625 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 TSPAN1O60635 241 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 MYL6BP14649 208 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 PDE1CQ14123 709 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 STK38Q15208 465 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 BBS9Q3SYG4 887 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 TTC39AQ5SRH9 613 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 PLBD1Q6P4A8 553 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 ZNF804AQ7Z570 1209 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CCDC110Q8TBZ0 833 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 AFAP1L1Q8TED9 768 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 HERC2P3Q9BVR0 1158 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SPON1Q9HCB6 807 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 HOMER2Q9NSB8 354 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 MYO6Q9UM54 1294 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 THSD7BQ9C0I4 1608 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 FER1L6Q2WGJ9 1857 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CCDC88AQ3V6T2 1871 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 MRC1P22897 1456 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 PTPDC1A2A3K4 754 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 LRRC72A6NJI9 287 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 DESP17661 470 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CAP2P40123 477 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 TUBA3CQ13748 450 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 OR8H1Q8NGG4 311 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 XAGE3Q8WTP9 111 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 MRPS27Q92552 414 aaKnown RBP7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 ERO1AQ96HE7 468 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 CTAGE1Q96RT6 745 aa7.22□□□□□ -1.25
TM9SF4-202ENST00000398022 SCHIP1Q9P0W5 487 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms