RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TAF4BQ92750 862 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 CCDC17Q96LX7 622 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.56
CPSF1P1-201ENST00000397477 LRRC10BA6NIK2 292 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 M0R2N6 131 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 CAPN2P17655 700 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 EHHADHQ08426 723 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 UTP14CQ5TAP6 766 aaKnown RBP11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 GOLPH3Q9H4A6 298 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAN1Q9Y2M0 1017 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 RSPH10B2B2RC85 870 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 MED24O75448 989 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 KIF20AO95235 890 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 RSPH10BP0C881 870 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 CKAP4Q07065 602 aaKnown RBP11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 HLTFQ14527 1009 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 KIAA0753Q2KHM9 967 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 SYDE2Q5VT97 1194 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 KLHL7Q8IXQ5 586 aa11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 LUC7LQ9NQ29 371 aaKnown RBP11.52□□□□□ -0.57
CPSF1P1-201ENST00000397477 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 CCDC151A5D8V7 595 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 VGLL3A8MV65 326 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 BRD3Q15059 726 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 DLGAP5Q15398 846 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 LEKR1Q6ZMV7 388 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ACER1Q8TDN7 264 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 RIN2Q8WYP3 895 aaPredicted RBP11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 HAS1Q92839 578 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 IKZF4Q9H2S9 585 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 BCAS3Q9H6U6 928 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 PHLPP1O60346 1717 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZBTB39O15060 712 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 SLC27A3Q5K4L6 730 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 GUF1Q8N442 669 aaKnown RBP11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ARMCX3Q9UH62 379 aaPredicted RBP11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 PRDM4Q9UKN5 801 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 GAKO14976 1311 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 PPP1R2P41236 205 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ASIC2Q16515 512 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ARHGAP44Q17R89 818 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 MTMR9Q96QG7 549 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ANKZF1Q9H8Y5 726 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 CAPN6Q9Y6Q1 641 aa11.51□□□□□ -0.57
CPSF1P1-201ENST00000397477 ABCB4P21439 1286 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 VAV2P52735 878 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 CASP8Q14790 479 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 IQCEQ6IPM2 695 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 RSRC2Q7L4I2 434 aaKnown RBP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 ADAT2Q7Z6V5 191 aaKnown RBP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 PROM2Q8N271 834 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZNF507Q8TCN5 953 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 ABCA3Q99758 1704 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 NHSL1Q5SYE7 1610 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 PVALEFA0A1B0GWK0 134 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 GAS7O60861 476 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 LLGL1Q15334 1064 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 ARHGAP20Q9P2F6 1191 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 ESYT3A0FGR9 886 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 MYBP10242 640 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 HOXA10P31260 410 aaPredicted RBP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 PRKG1Q13976 671 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 MAP9Q49MG5 647 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 MIIPQ5JXC2 388 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 LRCH2Q5VUJ6 765 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 CATSPER3Q86XQ3 398 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
CPSF1P1-201ENST00000397477 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 GUCY2FP51841 1108 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 TMEM179Q6ZVK1 233 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 DNAJC7Q99615 494 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 PCIF1Q9H4Z3 704 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 PDIA5Q14554 519 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms