RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TBCKQ8TEA7 893 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 SDF4Q9BRK5 362 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 DOCK5Q9H7D0 1870 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 KRT2P35908 639 aa28.85■■■□□ 2.21
TSPAN4-207ENST00000397411 USP11P51784 963 aa28.85■■■□□ 2.21
TSPAN4-207ENST00000397411 NIPA1Q7RTP0 329 aa28.85■■■□□ 2.21
TSPAN4-207ENST00000397411 KCNA2P16389 499 aa28.84■■■□□ 2.21
TSPAN4-207ENST00000397411 CDK7P50613 346 aa28.84■■■□□ 2.21
TSPAN4-207ENST00000397411 SAFBQ15424 915 aaKnown RBP eCLIP28.84■■■□□ 2.21
TSPAN4-207ENST00000397411 C8orf76Q96K31 380 aa28.84■■■□□ 2.21
TSPAN4-207ENST00000397411 TOX2Q96NM4 488 aa28.84■■■□□ 2.21
TSPAN4-207ENST00000397411 FAM86B1E9PN63 330 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 CD2BP2O95400 341 aaKnown RBP28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 FAM86B2P0C5J1 330 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 NPY5RQ15761 445 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 NBPF20Q3BBV1 942 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 PRR16Q569H4 304 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 ANKRD33Q7Z3H0 272 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 KATNAL1Q9BW62 490 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 AGO4Q9HCK5 861 aaKnown RBP28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 TMEM39AQ9NV64 488 aa28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 TNRC18O15417 2968 aaPredicted RBP28.83■■■□□ 2.21
TSPAN4-207ENST00000397411 M0R2N6 131 aa28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 CLTBP09497 229 aa28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 ZNF286BP0CG31 522 aa28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 SETQ01105 290 aaPredicted RBP28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 UTP14CQ5TAP6 766 aaKnown RBP28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 KRT40Q6A162 431 aa28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 CRYGNQ8WXF5 182 aa28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 KIF3AQ9Y496 699 aa28.82■■■□□ 2.2
TSPAN4-207ENST00000397411 GRIN2DO15399 1336 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 CIITAP33076 1130 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 PSEN2P49810 448 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 GUCY1B3Q02153 619 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 INF2Q27J81 1249 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 PIK3AP1Q6ZUJ8 805 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 SLC43A3Q8NBI5 491 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 OXER1Q8TDS5 423 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 GPR20Q99678 358 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 ZNF577Q9BSK1 485 aa28.81■■■□□ 2.2
TSPAN4-207ENST00000397411 MKI67P46013 3256 aaKnown RBP28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 MMP1P03956 469 aa28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 SEPT1Q8WYJ6 367 aa28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 UIMC1Q96RL1 719 aa28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 LBHD1Q9BQE6 289 aaPredicted RBP28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 JPH1Q9HDC5 661 aaPredicted RBP28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 SLC9A2Q9UBY0 812 aa28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 TCEAL9Q9UHQ7 104 aa28.8■■■□□ 2.2
TSPAN4-207ENST00000397411 NFASCO94856 1347 aa28.79■■■□□ 2.2
TSPAN4-207ENST00000397411 MFSD10Q14728 455 aa28.79■■■□□ 2.2
TSPAN4-207ENST00000397411 NFRKBQ6P4R8 1299 aa28.79■■■□□ 2.2
TSPAN4-207ENST00000397411 C7orf31Q8N865 590 aa28.79■■■□□ 2.2
TSPAN4-207ENST00000397411 PPP1R13LQ8WUF5 828 aa28.79■■■□□ 2.2
TSPAN4-207ENST00000397411 IGLV3-22A0A075B6J6 115 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 DDX39AO00148 427 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 IPO5O00410 1097 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 HOXD8P13378 290 aaPredicted RBP28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 FAAP100Q0VG06 881 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 GNL2Q13823 731 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 KIAA0753Q2KHM9 967 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 LETM2Q2VYF4 491 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 FAM126BQ8IXS8 530 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 DIS3L2Q8IYB7 885 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 KAT2BQ92831 832 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 PDLIM7Q9NR12 457 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 TBC1D22BQ9NU19 505 aa28.78■■■□□ 2.2
TSPAN4-207ENST00000397411 BTBD18B2RXH4 712 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 LGALS2P05162 132 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 SUPT20HL2P0C7V6 817 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 TCF7P36402 384 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 PTPN11Q06124 597 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 NR5A1Q13285 461 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 SH3RF1Q7Z6J0 888 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 NEK8Q86SG6 692 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 TRPV6Q9H1D0 765 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 ZNF215Q9UL58 517 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 SMC3Q9UQE7 1217 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 NOD1Q9Y239 953 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 SCN10AQ9Y5Y9 1956 aa28.77■■■□□ 2.2
TSPAN4-207ENST00000397411 H3BRB1 525 aa28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 RAG1P15918 1043 aa28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 ITGB3BPQ13352 177 aaPredicted RBP28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 NAP1L4Q99733 375 aaKnown RBP28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 C16orf70Q9BSU1 422 aa28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 TUT1Q9H6E5 874 aaKnown RBP28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 TELO2Q9Y4R8 837 aa28.76■■■□□ 2.19
TSPAN4-207ENST00000397411 GSTTP1A0A1W2PQM5 241 aa28.75■■■□□ 2.19
TSPAN4-207ENST00000397411 F2P00734 622 aa28.75■■■□□ 2.19
TSPAN4-207ENST00000397411 GLG1Q92896 1179 aa28.75■■■□□ 2.19
TSPAN4-207ENST00000397411 DDX25Q9UHL0 483 aaKnown RBP28.75■■■□□ 2.19
TSPAN4-207ENST00000397411 CEP290O15078 2479 aa28.75■■■□□ 2.19
TSPAN4-207ENST00000397411 CYP3A7-CYP3A51PA0A087WV96 503 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 TRIM43BA6NCK2 446 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 MARCH6O60337 910 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 B4GALT4O60513 344 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 TDP2O95551 362 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 CYP3A7P24462 503 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 MDM2Q00987 491 aaPredicted RBP28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 Q4G0T1 1027 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms